Job Description P45799 Confidence 99.65% Date Thu Jan 5 12:03:47 GMT 2012 Rank 64 Aligned Residues 131 % Identity 13% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																								.	.																													.
Query SS confidence																																								.	.																													.
Query Sequence		E	A	V	M	I	V	P	I	V	D	D	H	L	I	L	I	R	E	Y	A	V	G	T	E	S	Y	E	L	G	F	S	K	G	L	I	D	P	G	.	.	E	S	V	Y	E	A	A	N	R	E	L	K	E	E	V	G	F	G	A	N	D	L	T	F	L	K	K	L	.	S	M	A	P	S	Y	F	S	S	K	M
Query Conservation																																								.	.																													.
Alig confidence																												.												.	.																													.
Template Conservation																												.
Template Sequence		A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	F	L	G	L	.	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	R	D	A	R	G	W	S	V
Template Known Secondary structure									S	S	S										S	S	S	S	T	T		.				S						T	T	T			S														S	S			S											S	S	S		T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		N	I	V	V	A	Q	D	L	Y	P	E	S	L	E	G	D	E	P	E	P	L	P	Q	V	R	W	P	L	A	H	M	M	D	L	L	E	D	P	D	F	N	E	A	R	N	V	S	.	A	L	F	L	V	R	E	W	L	K
Query Conservation																																																	.
Alig confidence																																							.	.									.
Template Conservation																																							.	.
Template Sequence		T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	.	.	F	D	H	L	Q	L	I	E	Q	A	R	E	R	L	T	Q	K	A	L
Template Known Secondary structure											S									S		S	S										T	T	S		B	S	.	.	T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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