Job Description P45799 Confidence 99.36% Date Thu Jan 5 12:03:47 GMT 2012 Rank 72 Aligned Residues 132 % Identity 17% Template c2i6kA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1; PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog Resolution 2.00 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.
Predicted Secondary structure																						.													.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																						.													.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		N	R	E	A	V	M	I	V	P	I	V	D	D	H	L	I	L	I	R	E	.	Y	A	V	G	T	E	S	Y	E	L	G	F	.	S	K	G	L	I	D	P	G	E	S	.	.	.	.	.	.	.	.	.	V	Y	E	A	A	N	R	E	L	K	E	E	V	G	F	G	A	N	D	.	.	.	.	.	L	T	F
Query Conservation																						.													.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																						.													.											.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		H	R	A	F	S	V	F	L	F	N	T	E	N	K	L	L	L	Q	Q	R	S	D	A	K	I	T	F	P	G	C	F	T	N	T	C	C	S	H	P	L	S	N	P	A	E	L	E	E	S	D	A	L	G	V	R	R	A	A	Q	R	R	L	K	A	E	L	G	I	P	L	E	E	V	P	P	E	E	I	N	Y
Template Known Secondary structure												T	T										T	T		S	S	S	T	T				S	S						B	S	S	T	T	T	S			G	G	G																			G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																								.	.	.	.	.
Query SS confidence														.	.	.	.	.																																								.	.	.	.	.
Query Sequence		L	K	K	L	S	M	A	P	S	Y	F	S	.	.	.	.	.	S	K	M	N	I	V	V	A	Q	D	L	Y	P	E	S	L	E	G	D	E	P	E	P	L	P	Q	V	R	W	P	L	A	H	M	M	D	L	L	E	.	.	.	.	.	D	P	D	F	N	E	A	R	N	V	S	A	L	F	L	V	R	E	W
Query Conservation														.	.	.	.	.																																								.	.	.	.	.
Alig confidence														.	.	.	.	.										.	.																													.	.	.	.	.
Template Conservation																												.	.
Template Sequence		L	T	R	I	H	Y	K	A	Q	S	D	G	I	W	G	E	H	E	I	D	Y	I	L	L	V	R	.	.	X	N	V	T	L	N	P	D	P	N	E	I	K	S	Y	C	Y	V	S	K	E	E	L	K	E	L	L	K	K	A	A	S	G	E	I	K	I	T	P	W	F	K	I	I	A	A	T	F	L	F	K	W
Template Known Secondary structure											S	S	S	S	B													.	.									T	T	T																					T	T	S	S		B											T
Template Predicted Secondary structure																												.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions