Job Description P0CF59 Confidence 98.90% Date Thu Jan 5 11:31:15 GMT 2012 Rank 20 Aligned Residues 91 % Identity 22% Template d1pdnc_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain Resolution 2.50

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		A	L	I	A	R	G	W	G	V	S	L	V	S	R	C	L	R	V	S	R	A	Q	L	H	V	I	L	R	R	T	D	D	W	M	D	.	.	.	.	.	.	G	R	R	S	R	H	T	D	D	T	D	V	L	L	R	I	H	H	V	I	G	E	L	P	T	Y	G	Y	R	R	V	W	A	L	L	R	R	Q	A
Query Conservation																																					.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.
Template Conservation
Template Sequence		E	M	A	A	D	G	I	R	P	C	V	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	N	R	Y	Q	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	R	I	A	T	P	E	I	E	N	R	I	E	E	Y	K	R	S	S	P	G	M	F	S	W	E	I	R	E	K	L	I	R	E	G
Template Known Secondary structure						T	T											T																			S	S					S						S	S		S	T								T	T	T	T		T	T													T	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	D	G	M	P	A	I	N	A	K	R	V	Y	R	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	C	D	R	S	T	A	P	S	V	S	A	I	S	R	L	V
Template Known Secondary structure		S	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions