Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF59
Confidence70.31%DateThu Jan 5 11:31:15 GMT 2012
Rank359Aligned Residues57
% Identity18%Templated1k78a2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.......
Predicted Secondary structure 





















Query SS confidence 
























































Query Sequence  GRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMR
Query Conservation                 
          
   
   
                
     
Alig confidence 
























































Template Conservation 









 

 

   
 


 










 



   












Template Sequence  GGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIR
Template Known Secondary structure 




SSS

TT

TTSS
TTTS

Template Predicted Secondary structure 
























Template SS confidence 
























































   84.....90.........100.........110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions