Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF59
Confidence86.53%DateThu Jan 5 11:31:15 GMT 2012
Rank240Aligned Residues31
% Identity23%Templatec2zcmB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:biofilm operon icaabcd hth-type negative transcriptional PDBTitle: crystal structure of icar, a repressor of the tetr family
Resolution1.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10 .........20.........30.
Predicted Secondary structure 


....





Query SS confidence 









. . . .




















Query Sequence  MDSARALIAR. . . . GWGVSLVSRCLRVSRAQLHVI
Query Conservation      
 
   ....
 

  

   



 


  
Alig confidence 









....




















Template Conservation 
 

  
    
    

  

  



  


  
Template Sequence  IDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYH
Template Known Secondary structure 
TTT

TT

GGGGGGT
Template Predicted Secondary structure 








Template SS confidence 


































   6...10.........20.........30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions