Job Description P0CF59 Confidence 93.19% Date Thu Jan 5 11:31:15 GMT 2012 Rank 44 Aligned Residues 62 % Identity 11% Template c2w7nA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		M	D	S	A	R	A	L	I	A	R	G	W	G	V	S	L	V	S	R	C	L	R	V	S	R	A	Q	L	H	V	I	L	R	R	T	D	D	W	M	D	G	R	R	S	R	H	T	.	.	.	.	.	.	.	D	D	T	D	V	L	L	R	I	H	H	V	I	G	E
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	I	A	R	G	V	L	V	D	G	K	P	Q	A	T	F	A	T	S	L	G	L	T	R	G	A	V	S	Q	A	V	H	R	V	W	A	A	F	E	D	K	N	L	P	E	G	Y	A	R	V	T	A	V	L	P	E	H	Q	A	Y	I	V	R	K	W	E	A	D
Template Known Secondary structure										T	T												T																				T				T	T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions