Job Description P0CF59 Confidence 85.00% Date Thu Jan 5 11:31:15 GMT 2012 Rank 270 Aligned Residues 66 % Identity 15% Template c2jmlA_ PDB info PDB header:transcription Chain: A: PDB Molecule:dna binding domain/transcriptional regulator; PDBTitle: solution structure of the n-terminal domain of cara repressor Resolution UNK

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		W	G	V	S	L	V	S	R	C	L	R	V	S	R	A	Q	L	H	V	I	L	R	R	T	D	D	W	M	D	G	R	R	S	R	H	T	D	.	.	.	.	.	.	D	T	D	V	L	L	R	I	H	H	V	I	G	E	L	P	T	Y	G	Y	R	R	V	W	A	L	L	R	R	Q
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.																	.
Template Conservation																																																													.
Template Sequence		L	R	I	R	T	I	A	R	M	T	G	I	R	E	A	T	L	R	A	W	E	R	R	Y	G	F	P	R	P	L	R	S	E	G	N	N	Y	R	V	Y	S	R	E	E	V	E	A	V	R	R	V	A	R	L	I	Q	E	E	G	.	L	S	V	S	E	A	I	A	Q	V	K	T	E
Template Known Secondary structure										T	T	S	T	T											T			S			B	S	S	S		S	S	S																					T	S	.	T												S
Template Predicted Secondary structure																																																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions