Job Description P27833 Confidence 99.94% Date Thu Jan 5 11:44:10 GMT 2012 Rank 132 Aligned Residues 349 % Identity 18% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																												.																																																.	.	.	.	.	.
Query SS confidence																												.																																																.	.	.	.	.	.
Query Sequence		M	I	P	F	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	.	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	.	.	.	.	.	.
Query Conservation																												.																																																.	.	.	.	.	.
Alig confidence																												.																																									.							.	.	.	.	.	.
Template Conservation																																																																					.
Template Sequence		F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	R	G	D	E	A	F	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	.	I	K	K	R	E	Q	E	K	G	L	D	R
Template Known Secondary structure		S				S			T	T		S										T	T	S					S	S	S															T			S							S	S	T	T	T									.												T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.
					74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.														.	.	.	.
Query SS confidence		.	.	.																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.														.	.	.	.
Query Sequence		.	.	.	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	.	.	.	.	.	.	.	.	.	T	M	N	I	D	E	T	L	I	E	A	A	I	T	.	.	.	.	.	.	.	D	K	T	R	V	I	V	P	V	H	Y	A	G	.	.	.	.
Query Conservation		.	.	.																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.														.	.	.	.
Alig confidence		.	.	.																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V
Template Known Secondary structure		T	T						S	S												T	T							B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.															.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																										.
Template Sequence		S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	.	G	L	L	C	M	K	D
Template Known Secondary structure																T	T								T	T													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S		.							S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Sequence		D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T	Y	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	V	Q	.
Template Known Secondary structure		G	G	G													T	T	S	S							.	.	.	.	.	.	.	.	.	.	.	.															T	T																						T	T				.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.													310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	.	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L
Query Conservation																																																.
Alig confidence		.																																														.																			.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	.	.	.	.	.	.	.	.	.	.	L	R	L	T	I
Template Known Secondary structure		.				S	S										S	T	T	S		G	G	G																						S						B		T	T	T		S	B				S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.											.	.	420	.	.
		356	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		F	Y	N	L	.	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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