Job Description P27833 Confidence 99.96% Date Thu Jan 5 11:44:10 GMT 2012 Rank 59 Aligned Residues 339 % Identity 16% Template d2r5ea1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.84

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		1	.	.	.			.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure						.	.							.	.																.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence						.	.							.	.																.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		M	I	P	F	.	.	N	A	P	P	V	V	.	.	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	.	.	.	.	L	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	.	.	.	.	.	.	.	.	.	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A
Query Conservation						.	.							.	.																.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence						.	.							.	.																.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	N	L	G	Q	G	F	P	D	Y	H	A	P	K	Y	A	L	N	A	L	A	A	A	A	N	S	P	D	P	L	A	N	Q	Y	T	R	G	F	G	H	P	R	L	V	Q	A	L	S	K	L	Y	S	Q	L	V	D	R	T	I	N	P	M	T	E	V	L	V	T	V	G	A	Y	E	A	L	Y	A	T	I
Template Known Secondary structure						S	S	S			S	S															T		S		G	G	G	G	S				T	T																		T	S				T	T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	.	.	.	.	.	.	.	.	.	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	.	.	.	H	Y	A	G	V
Query Conservation																																													.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence					.																																								.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation					.
Template Sequence		Q	G	H	.	V	D	E	G	D	E	V	I	I	I	E	P	F	F	D	C	Y	E	P	M	V	K	A	A	G	G	I	P	R	F	I	P	L	K	P	N	K	T	G	G	T	I	S	S	A	D	W	V	L	D	N	N	E	L	E	A	L	F	N	E	K	T	K	M	I	I	I	N	T	P	H	N	P	L	G	K
Template Known Secondary structure					.			T	T								S			T	T								T	T											S			S	S				G	G	G														T	T								S	S		T	T	T
Template Predicted Secondary structure					.
Template SS confidence
		119	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		132	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure					.	.	.																																		.	.	.	.	.
Query SS confidence					.	.	.																																		.	.	.	.	.
Query Sequence		A	C	E	.	.	.	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	.	.	.	.	.	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A
Query Conservation					.	.	.																																		.	.	.	.	.
Alig confidence					.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		V	M	D	R	A	E	L	E	V	V	A	N	L	C	K	K	W	N	V	L	C	V	S	D	E	V	Y	E	H	M	V	F	E	P	F	E	H	I	R	I	C	T	L	P	G	M	W	E	R	T	I	T	I	G	S	A	G	K	T	F	S	L	T	G	W	K	I	G	W	A	Y	G	P	E	A	L	L	K	N	L
Template Known Secondary structure																			T								T	T	T	T		B		T	T						G	G	G	S	T	T	T	G	G	G											T	T		G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Sequence		Q	M	V	H	Q	N	C	V	Y	T	C	A	T	P	I	Q	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	V	G	F	E	T	E	L	K	R	L	K	S	P	E	C	Y	F	N	S	I	S	G	E	L	M	A	K	R	D	Y	M	A	S	F	L	A	E	.	.	.	.	.	.	V	G	M	N
Template Known Secondary structure						T	T	T	T		S									.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	T	S	T	T	S																							.	.	.	.	.	.	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.														.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.							.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.														.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	V	P	Q	G	G	Y	F	M	V	A	D	W	S	S	L	D	S	K	V	D	L	T	Q	E	T	D	A	R	K	D	Y	R	F	T	K	W	M	T	K	S	V	G	L	Q	G	I	P	P	S	A	F	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	N	K	H	L	G	E	D	F
Template Known Secondary structure						S	B	S	S							G	G	G	S	T	T			G	G	G				S	S														S				B		G	G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																.	.	.	.	.	.	400	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F	S
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		V	R	Y	C	F	F	.	.	K	K	D	E	N	L	Q	K	A	A	E	I	L	R	K	W	K	G
Template Known Secondary structure								.	.	S																	T
Template Predicted Secondary structure								.	.
Template SS confidence
		404	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions