Job Description P27833 Confidence 99.86% Date Thu Jan 5 11:44:10 GMT 2012 Rank 209 Aligned Residues 319 % Identity 12% Template d1zoda1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.80

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																						.	.	.															.	.																				.	.	.
Query SS confidence																						.	.	.															.	.																				.	.	.
Query Sequence		G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	.	.	.	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	.	.	G	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	.	.	.	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V
Query Conservation																						.	.	.															.	.																				.	.	.
Alig confidence																						.	.	.															.	.																				.	.	.					.
Template Conservation																																																																			.
Template Sequence		P	E	I	V	S	V	I	G	E	Y	A	G	K	L	D	H	L	F	S	E	M	L	S	R	P	V	V	D	L	A	T	R	L	A	N	I	T	P	P	G	L	D	R	A	L	L	L	S	T	G	A	E	S	N	E	A	A	I	R	M	A	K	L	V	T	.	G	K	Y	E	I	V	G	F	A	Q	S	W	H	G
Template Known Secondary structure																				T	T																	S		T	T								S																		.	T								T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140
		83	.	.	.	.	.	.	90	.	.	.	.	.	.																							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		S	T	A	N	A	F	V	L	R	G	A	K	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	.	.	.	.	.	.	.	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	G	A	A	A	S	A	T	Y	S	A	G	R	K	G	V	G	P	A	A	V	G	S	F	A	I	P	A	P	F	T	Y	R	P	R	F	E	R	N	G	A	Y	D	Y	L	A	E	L	D	Y	A	F	D	L	I	D	R	Q	S	S	G	N	L	A	A	F	I	A	E	P	I	L	S	S	G	G	I	I	E
Template Known Secondary structure		S	S						T			S	S			S	S	S					T	T									T	T	S						T	T																					S									S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		134					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		E	.	.	.	.	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		L	P	D	G	Y	M	A	A	L	K	R	K	C	E	A	R	G	M	L	L	I	L	D	E	A	Q	T	G	V	G	R	T	G	T	M	F	A	C	Q	R	D	G	V	T	P	D	I	L	T	L	S	K	T	L	G	A	G	L	P	L	A	A	I	V	T	S	A	A	I	E	E	R	A	H	E	L	G	Y	L	F
Template Known Secondary structure				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S										T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template Sequence		Y	T	T	H	V	S	D	P	L	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	L	R	V	L	D	V	V	Q	R	D	G	L	V	A	R	A	N	V	M	G	D	R	L	R	R	G	L	L	D	L	M	E	R	F	D	C	I	G	D	V	R	G	R	G	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T																								T	T								T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.															.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.									.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure										.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.
Query Sequence		A	H	M	F	Y	I	K	L	.	.	.	.	.	.	.	.	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P
Query Conservation										.	.	.	.	.	.	.	.
Alig confidence		.								.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	L	L	L	G	V	E	I	V	K	D	R	R	T	K	E	P	A	D	G	L	G	A	K	I	T	R	E	C	M	N	L	G	L	S	M	N	I	V	Q	L	P	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	F	R	I	A	P	P	L	T	V	S	E
Template Known Secondary structure		.	T										T	T	T	T				T	T												T	T									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.																							.	.	.	.	.	.	.	.	410	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	I	D	L	G	L	S	L	L	G	Q	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions