Job Description P27833 Confidence 99.95% Date Thu Jan 5 11:44:10 GMT 2012 Rank 98 Aligned Residues 329 % Identity 10% Template d1w23a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.08

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		2	.	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.													.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.		.	.	.	.	.	60	.	.
Predicted Secondary structure									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Query SS confidence									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Query Sequence		I	P	F	N	A	P	P	.	.	.	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	G	F	.	.	.	.	.	.	.	.	.	.	.	.	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	.	.	.	K	V	L	L	T	P	S	.	C	T	A	S	L	E	M	A
Query Conservation									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Alig confidence									.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.																.	.	.								.
Template Conservation
Template Sequence		V	F	N	F	N	A	G	P	S	A	L	P	K	P	A	L	E	R	A	Q	K	E	L	L	N	F	N	D	T	Q	M	S	V	M	E	L	S	H	R	S	Q	S	Y	E	E	V	H	E	Q	A	Q	N	L	L	R	E	L	L	Q	I	P	N	D	Y	Q	I	L	F	L	Q	G	G	A	S	L	Q	F	T	M	L
Template Known Secondary structure							S	S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																			T			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																									.	.						.
Query SS confidence																							.	.																									.	.						.
Query Sequence		A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	.	.	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	.	.	D	E	T	L	I	.	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D	T
Query Conservation																							.	.																									.	.						.
Alig confidence						.																	.	.																									.	.						.																							.	.	.
Template Conservation						.																																																																									.	.	.
Template Sequence		P	M	N	L	.	L	T	K	G	T	I	G	N	Y	V	L	T	G	S	W	S	E	K	A	L	K	E	A	K	L	L	G	E	T	H	I	A	A	S	T	K	A	N	S	Y	Q	S	I	P	D	F	S	E	F	Q	L	N	E	N	D	A	Y	L	H	I	T	S	N	N	T	I	Y	G	T	Q	Y	Q	.	.	.
Template Known Secondary structure						.			T	T									S												T	T	S									G	G	G	T	S		S				G	G	G					T	T								S			T	T	T	T				S	.	.	.
Template Predicted Secondary structure						.																																																																									.	.	.
Template SS confidence
		84	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F
Query Conservation
Alig confidence		.	.																													.	.	.								.	.	.																						.	.	.	.
Template Conservation		.	.																													.	.	.								.	.	.																						.	.	.	.
Template Sequence		.	.	N	F	P	E	I	N	H	A	P	L	I	A	D	M	S	S	D	I	L	S	R	P	L	K	V	N	Q	F	.	.	.	G	M	I	Y	A	G	A	.	.	.	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	K	K	D	L	L	N	T	.	.	.	.	K	V	E	Q	V	P	T	M	L	Q	Y	A
Template Known Secondary structure		.	.	S						S	S							T	T	T	T	T	S	S				G	G	G		.	.	.	S						T	.	.	.	T	T	T	T	S		T	T													S	.	.	.	.			T	T			G	G	G
Template Predicted Secondary structure		.	.																													.	.	.								.	.	.																						.	.	.	.
Template SS confidence
				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L
Query Conservation
Alig confidence																																																														.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		T	H	I	K	S	D	S	L	Y	N	T	P	P	T	F	S	I	Y	M	L	R	N	V	L	D	W	I	K	D	L	G	G	A	E	A	I	A	K	Q	N	E	E	K	A	K	I	I	Y	D	T	I	D	E	S	N	G	F	Y	V	G	.	.	.	.	H	A	E	K	G	S	R	S	L	M	N	V	T	F	N	L
Template Known Secondary structure						T	T	T		S	S																				T	T																						T	T	T	T	S	S			.	.	.	.	S	S		G	G	G	B		S	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	E	E	L	N	Q	Q	F	L	A	K	A	K	E	Q	G	F	V	G	L	N	G	H	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	C	R	A	S	I	Y	N	A	V	P	I	D	A	C	I	A	L	R	E	L	M	I	Q	F
Template Known Secondary structure		S	S														T	T			S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.																									330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions