Job Description P27833 Confidence 99.96% Date Thu Jan 5 11:44:10 GMT 2012 Rank 84 Aligned Residues 333 % Identity 16% Template d1tpla_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.30

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	P	F	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	.	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T
Query Conservation																											.
Alig confidence																											.																																									.
Template Conservation																																																																				.
Template Sequence		I	D	L	L	T	D	S	G	T	N	A	M	S	D	K	Q	W	A	G	M	M	M	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	R	T	V	Q	E	L	F	G	F	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	.	I	K	P	G	Q	Y	V	A	G	N	M	Y	K
Template Known Secondary structure					S		S	S	S													T	T					S	S	S																		S						S	S													.			T	T						S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.														.	.	.	.
Query Sequence		F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	.	.	.	.	.	.	.	D	K	T	R	V	I	V	P	V	H	Y	A	G	.	.	.	.	V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V
Query Conservation																																							.	.	.	.	.	.	.														.	.	.	.
Alig confidence																									.														.	.	.	.	.	.	.														.	.	.	.
Template Conservation																									.
Template Sequence		N	G	A	V	F	V	D	I	V	R	D	E	A	H	D	A	G	L	N	I	A	F	K	.	G	D	I	D	L	K	K	L	Q	K	L	I	D	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	R	E	L	T	A	A	H	G	I	K	V
Template Known Secondary structure			S	S						B		T	T	S	S		S	S				T	T	T	.	T		B														G	G	G								S	S	B		S	T	T		B																	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.															.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																							.
Template Sequence		F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	Q	G	F	E	N	K	S	I	A	E	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	.	G	F	L	C	M	N	D	D	E	M	F	S	S	A	K	E	L	V	V	V	Y	E	G	M	P	S
Template Known Secondary structure						T	T												S	T	T		T	T	S												T	S	S						T	T	T	T	T			S	S		.																							S	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		Y	G	G	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	K	A	A	.	G	V	P	I	V	E	P	V	G	G	H	A	V	F	L	D	A	R	R	F	C	E	H
Template Known Secondary structure		S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T																					T	T	.	T			B		S	S			S	S										T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		291	.	.	.	.	.															.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																		.																																																	.
Query SS confidence																		.																																																	.
Query Sequence		K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	.	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	.	S	P	V	N	Q	R	T	V	I	A	T	L	L	N
Query Conservation																		.																																																	.
Alig confidence																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	Q	D	E	F	P	A	Q	S	L	A	A	S	I	Y	V	E	T	G	V	R	S	M	E	R	G	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K
Template Known Secondary structure		S		G	G	G															S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																									.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		374	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	Q
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		427	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions