Job Description P27833 Confidence 99.97% Date Thu Jan 5 11:44:10 GMT 2012 Rank 50 Aligned Residues 355 % Identity 13% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		1	.	.	.				.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																											.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence						.	.	.																											.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		M	I	P	F	.	.	.	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	.	.	.	.	.	.	.	.	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	.	.	.	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L
Query Conservation						.	.	.																											.	.	.	.	.	.	.	.																		.	.	.
Alig confidence						.	.	.																											.	.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		L	V	Y	L	D	N	A	A	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	S	P	R	E	I	V	Y	T	R	N	A	T	E	A	I	N	L	V	A	Y	S	W
Template Known Secondary structure						B	T	T	T																			T							S																					T	T		S		G	G	G					S	S												T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		67				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																									.	.	.	.																															.	.	.
Query SS confidence			.	.	.																									.	.	.	.																															.	.	.
Query Sequence		D	.	.	.	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	.	.	.	.	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	.	.	.	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D
Query Conservation			.	.	.																									.	.	.	.																															.	.	.
Alig confidence			.	.	.																									.	.	.	.													.																		.	.	.
Template Conservation																																														.
Template Sequence		G	M	N	N	L	K	A	G	D	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	L	D	E	Q	.	E	S	F	D	L	E	H	F	K	T	L	L	S	E	K	T	K	L	V	T	V	V	H	I	S	N	T	L	G	C	V	N	P	A	E
Template Known Secondary structure								T	T							T	T			G	G	G	T																			B		T	T	.	S	S	B											T	T								S	B		T	T	T		B	B
Template Predicted Secondary structure																																														.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F
Query Conservation
Alig confidence																														.	.	.																					.	.
Template Conservation																														.	.	.																					.	.
Template Sequence		E	I	A	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	A	P	H	Y	P	L	D	V	.	.	.	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	A	P	T	G	.	.	I	G	F	L	Y	G	K	E	E	I	L	E	A	M	P	P	F	F	G	G	G	E	M	I	A	E	V
Template Known Secondary structure										T	T								T	T	T	T	T	T	S					.	.	.				T		S						G	G	G	T	T	S		T	T	.	.														S				S		S	T	T	S
Template Predicted Secondary structure																														.	.	.																					.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	.	.	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y
Query Conservation																																							.	.
Alig confidence																																							.	.
Template Conservation
Template Sequence		F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T	H	Y	L	W	Q	G	L	G	Q	I	P	Q	L	R	L	Y	G	P	N	P	K	H	G	D	R	A	A	L	A	S
Template Known Secondary structure			S	S							T	T	G	G	G			S	S																																									T		T	T					S			G	G	G	S		B		S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	.
Query Conservation																																																																																	.
Alig confidence						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	N	V	A	.	G	L	H	A	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	L	F	D	A	S	G	S	A	R	A	S	L	Y	F	Y	N	T	K	E	E	I	D	L	F	L	Q	S	L	Q	A	T
Template Known Secondary structure					T	.	T	B											T	T	T				B		S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T											T	T
Template Predicted Secondary structure						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.															.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
				374	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Y	F	S
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		I	R	F	F	S
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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