 |
Job Description | P27833 | Confidence | 42.61% | Date | Thu Jan 5 11:44:10 GMT 2012 |
Rank | 301 | Aligned Residues | 113 |
% Identity | 12% | Template | d1p5ja_ |
SCOP info | Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
| Tryptophan synthase beta subunit-like PLP-dependent enzymes
|
Resolution | 2.50 |
|
 |
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | R | F | G | S | A | K | V | L | L | T | P | S | C | T | A | S | L | E | M | A | A | L | L | L | D | I | Q | P | G | D | E | V | I | M | P | S | Y | T | F | V | S | T | A | N | A | F | V | L | R | G | A | K | I | V | F | V | D | V | R | P | D | T | M | N | I | D | E | T | L | I | E | A | A | I | T | D | K | T |
Query Conservation |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
W | A | K | Q | G | C | A | H | F | V | C | S | S | A | G | N | A | G | M | A | A | A | Y | A | A | R | Q | L | G | V | P | A | T | I | V | V | P | G | T | T | P | A | L | T | I | E | R | L | K | N | E | G | A | T | C | K | V | V | G | E | L | L | D | E | A | F | E | L | A | K | A | L | A | K | N | N | P | G | W | V |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
  |   |
121 | . | . | . | . | . | . | . | . | |
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | I | V | P | V | H | Y | A | . |
. |
. |
G | V | A | C | E | M | D | T | I | M | A | L | A | K | K | H | N | L | F | V | V | E | D | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |
Template Sequence |   |
Y | I | P | P | F | D | D | P | L | I | W | E | G | H | A | S | I | V | K | E | L | K | E | T | L | W | E | K | P | G | A | I | A | L | S | V |
Template Known Secondary structure |   |
 |
|
| S | S |
|
|  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|