Job Description P27833 Confidence 99.96% Date Thu Jan 5 11:44:10 GMT 2012 Rank 68 Aligned Residues 334 % Identity 12% Template d1kl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.93

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.											.	.	.	.															.
Query SS confidence																											.	.	.	.	.	.	.	.											.	.	.	.															.
Query Sequence		M	I	P	F	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	.	.	.	.	.	.	.	.	L	C	G	D	G	G	F	T	R	R	.	.	.	.	C	Q	Q	W	L	E	Q	R	F	G	S	A	K	V	.	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D
Query Conservation																											.	.	.	.	.	.	.	.											.	.	.	.															.
Alig confidence					.																						.	.	.	.	.	.	.	.											.	.	.	.															.																		.
Template Conservation					.																																																																												.
Template Sequence		L	I	A	.	S	E	N	F	V	S	R	A	V	M	E	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	P	G	R	R	Y	Y	G	G	C	E	Y	V	D	I	V	E	E	L	A	R	E	R	A	K	Q	L	F	G	A	E	H	A	N	V	Q	P	H	S	G	A	Q	A	N	M	A	V	Y	F	T	V	.
Template Known Secondary structure				T	.	T													T	S	G	G	G	G							T	T			S	S	S																							S							S	S													.
Template Predicted Secondary structure					.																																																																												.
Template SS confidence
		28	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																											.	.	.	.	.																										.	.
Query SS confidence																											.	.	.	.	.																										.	.
Query Sequence		I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	.	.	.	.	.	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	.	.	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D	T	I	M	A
Query Conservation																											.	.	.	.	.																										.	.
Alig confidence																											.	.	.	.	.																										.	.
Template Conservation
Template Sequence		L	E	H	G	D	T	V	L	G	M	N	L	S	H	G	G	H	L	T	H	G	S	P	V	N	F	S	G	V	Q	Y	N	F	V	A	Y	G	V	D	P	E	T	H	V	I	D	Y	D	D	V	R	E	K	A	R	L	H	R	P	K	L	I	V	A	A	A	S	A	Y	P	R	I	I	D	F	A	K	F	R	E
Template Known Secondary structure				T	T								G	G	G	T			G	G	G	T		T	T	S						S							B		T	T	T		S	B															S							S	S			S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q
Query Conservation
Alig confidence																																																		.																													.	.	.
Template Conservation																																																		.																													.	.	.
Template Sequence		I	A	D	E	V	G	A	Y	L	M	V	D	M	A	H	I	A	G	L	V	A	A	G	L	H	P	N	P	V	P	Y	A	H	F	V	T	T	T	T	H	K	T	L	R	G	P	R	G	.	G	M	I	L	C	Q	E	Q	F	A	K	Q	I	D	K	A	I	F	P	G	I	Q	G	G	P	L	M	H	.	.	.
Template Known Secondary structure							T								T	T	T						T	T	S	S			S	T	T	T		S						S	S	S	T	T				S		.																		T	T	T	T		S	S					.	.	.
Template Predicted Secondary structure																																																		.																													.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	A	K	A	V	A	F	G	E	A	L	Q	D	D	F	K	A	Y	A	K	R	V	V	D	N	A	K	R	L	A	S	A	L	Q	N	E	.	.	.	.	.	.	.	G	F	T	L	V	S	G	G	T	D	N	H	L	L	L	V	D	L	R	P	Q	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.														S																								T	.	.	.	.	.	.	.	T				G	G	G	S		S	S	S							G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template SS confidence
															262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.								300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	.	.	.	.	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F	S
Query Conservation																																																										.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	G	K	T	A	E	K	V	L	D	E	V	G	I	T	V	N	K	N	T	I	P	Y	D	P	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	V	T	S	G	I	R	I	G	T	A	A	V	T	T	R	G	F	G	L	E	E	M	D	E	I	A	A	I	I	G	L	V	L	K
Template Known Secondary structure															T									T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T		S												T	T																		T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.																	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions