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Job DescriptionP27833
Confidence99.92%DateThu Jan 5 11:44:10 GMT 2012
Rank163Aligned Residues302
% Identity15%Templated1iaya_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40... ......50.........60.........70.........80.........90.. ...
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Query Sequence  CGDGGFTRRCQQWLEQR. . . . . . . . . . FGSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRG. AKI
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Template Sequence  FQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCL. ADPGDAFLVPSPYYPAFNRDLRWRTGVQL
Template Known Secondary structure 


TT

TTT
S


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TT
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   8990.........100.........110.........120.........130........ .140.........150.........160.......
 
   96...100..... ....110........ .120.........130 .........140.........150.........160..
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Query Sequence  VFVDVRPDTM. NIDETLIEAAITD. . . . . . . . . KTRVIVPVHYAG. . . VACEMDTIMALAKKHNLFVVEDAAQGVMSTYK
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Template Sequence  IPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDT
Template Known Secondary structure 


TTTTT


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TTT




TTT

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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   163 ......170.........180.... .....190.........200.........210.........220.........
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Query Sequence  G. . . . . . . . . . . . RALGTIGHIGCFSFHETKNYT. AGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDI
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Template Sequence  PQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGL. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S



TSGGGTTS
TTSSTTTSS
GGG
S
TTS
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   248.250.........260.........270.........280.........290.........300.........
 
   230.........240.........250.........260.........270.........280.........290.........300...
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Query Sequence  GSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDIDDR. . . . . .
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Template Sequence  . . . . . VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFT. . NGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSE
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TT
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B


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   310.........320.........330.........340....... ..350.........360.........370.........380..
 
   304.....310.........320.........330.........340.........350.........360.........370.....
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Query Sequence  . SALINFLKEAEIMAVFHYIPLHGCPAGEHFGEFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYF
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Template Sequence  MSLWRVIINDVKLNVSPGSSFECQE. . . . . . . . . . . . . . . . . . . . PGWFRVCFA. NMDDGTVDIALARIRRFV
Template Known Secondary structure  TS

GGGGT
SS....................SS
S.SS
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   383......390.........400....... ..410...... ...420.........430....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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