Return to main results Retrieve Phyre Job Id

Job DescriptionP27833
Confidence37.38%DateThu Jan 5 11:44:10 GMT 2012
Rank318Aligned Residues33
% Identity12%Templated1gjwa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.......
Predicted Secondary structure 













Query SS confidence 
































Query Sequence  PVHYAGVACEMDTIMALAKKHNLFVVEDAAQGV
Query Conservation       
    
  
          

 
 
   
Alig confidence 
































Template Conservation       
   


 

 
 
 


 





 

Template Sequence  LLEPFKVDEEFKAFVEACHILGIRVILDFIPRT
Template Known Secondary structure  GGTTS
TT

TT
Template Predicted Secondary structure 











Template SS confidence 
































   174.....180.........190.........200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions