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Job DescriptionP27833
Confidence99.97%DateThu Jan 5 11:44:10 GMT 2012
Rank31Aligned Residues340
% Identity16%Templated1cl1a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution1.83

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.... .....30 .........40.........50.........60.........70.......
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Query Sequence  FNAPPVVGTELDYMQSAMGSG. . . . KLCGDG. . GFTRRCQQWLEQRFGSAKVLLTPSCTASLEMAALLLDIQPGDEVIMP
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Template Sequence  QRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAF. IEQGDHVLMT
Template Known Secondary structure 


S



SSTTTTT



TTT

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   2930.........40.........50.........60.........70.........80.........90....... ..100.......
 
   78.80.........90. ........100.........110.........120.........130.........140..... ....150.
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Query Sequence  SYTFVSTANAFVLR. . . . GAKIVFVDVRPDTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKH. . NLFVVE
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Template Sequence  NTAYEPSQDFCSKILSKLGVTTSWFDPL. . . IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMI
Template Known Secondary structure  TTS
TGGGGT

TT...
GGGGGGT

TTSS
TTT





TT
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   108.110.........120.........130..... ....140.........150.........160.........170.........180....
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  DAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGS
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Template Sequence  DNTWAAGVLFKALDFG. . . . IDVSIQAATYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQM. . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TTTTTTSS
GGGGT....
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   185....190.........200 .........210.........220.........230.........240..
 
   232.......240.........250.........260.........270.........280..... ....290.........300..
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Query Sequence  SYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDG. . . . . . . . . CVQNAHMFYIKLRDIDD
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Template Sequence  . . . VDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLN
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TTT
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   244.....250.........260.........270.........280.........290.........300.........310.........320
 
   303......310.. .......320.........330.........340.........350.........360.........370...
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Query Sequence  RSALINFLKE. . . AEIMAVFHYIPLHGCPAGEHFGEFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLN
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Template Sequence  NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIR. PQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR
Template Known Secondary structure  TT
SS
B

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   321........330.........340.........350......... 360.........370.........380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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