Job Description P27833 Confidence 99.93% Date Thu Jan 5 11:44:10 GMT 2012 Rank 145 Aligned Residues 325 % Identity 9% Template d1bjna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		2	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.													.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.		.	.	.	.	.	.	60	.	.
Predicted Secondary structure								.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.
Query SS confidence								.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.
Query Sequence		I	P	F	N	A	P	.	.	.	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	G	F	.	.	.	.	.	.	.	.	.	.	.	.	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	.	.	.	K	V	L	L	T	P	.	S	C	T	A	S	L	E	M	A
Query Conservation								.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.
Alig confidence								.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.							.
Template Conservation
Template Sequence		I	F	N	F	S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	A	V
Template Known Secondary structure							S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		T	T	S																			T			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																						.	.
Query SS confidence																							.	.																						.	.
Query Sequence		A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	.	.	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	.	.	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D	T	I
Query Conservation																							.	.																						.	.
Alig confidence						.																	.	.																						.	.
Template Conservation						.
Template Sequence		P	L	N	I	.	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E	T	I	D	G	I	A	I	D	E	T
Template Known Secondary structure						.		T	T									S	S											T	T	T	S												T	T							G	G	G					S	S		S						S			T	T	T	T
Template Predicted Secondary structure						.
Template SS confidence
		84	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R
Query Conservation
Alig confidence					.	.																						.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																						.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	F	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	.	.	.	.	.	S	R	Y	G	V	I	Y	A	G	A	Q	N	I	.	.	G	P	A	G	L	T	I	V	I	V	R	E	.	.	.	.	.	.	.	.	.	.	D	L	L	G	K	A	N	I	A	C	P	S
Template Known Secondary structure					.	.		T	T								T	T	T	T	T	S	S				G	.	.	.	.	.	G	G		S										.	.	S	S	T	T								G	.	.	.	.	.	.	.	.	.	.	G	G		S				T	T	S		G
Template Predicted Secondary structure					.	.																						.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	.	.	.	.	.	.	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	R	N	R	.	.	.	.	.	S	R	M	N
Template Known Secondary structure		G	G								T	T	T		S	S																				T	T																								S	S					B		G	G	G	B	.	.	.	.	.		S	S
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.						.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	F	Q	L	A	D	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V
Template Known Secondary structure							S	S	G	G	G											T	T					B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																									.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		373	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		356	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions