Job Description P27833 Confidence 99.90% Date Thu Jan 5 11:44:10 GMT 2012 Rank 185 Aligned Residues 349 % Identity 17% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																												.																																																.	.	.	.	.	.
Query SS confidence																												.																																																.	.	.	.	.	.
Query Sequence		M	I	P	F	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	.	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	.	.	.	.	.	.
Query Conservation																												.																																																.	.	.	.	.	.
Alig confidence																												.																																									.							.	.	.	.	.	.
Template Conservation																																																																					.
Template Sequence		Y	I	D	L	L	T	D	S	G	T	N	A	M	S	D	H	Q	W	A	A	M	I	T	G	D	E	A	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	Y	D	Y	I	I	P	A	H	Q	G	R	G	A	E	N	I	L	F	P	V	L	.	L	K	Y	K	Q	K	E	G	K	A	K	N
Template Known Secondary structure		S				S		S	S	S														T					S	S	S																								S	S													.							T	T			S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.
			74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130					.	.
Predicted Secondary structure		.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence		.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		.	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	.	.	.	.	.	.	.	.	.	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	.	.	.	.	.	.	.	T	R	V	I	V	P	V	H	Y	A	G	.	.	.	.	V	A
Query Conservation		.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.												.	.	.	.
Alig confidence		.																															.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	D	I	K	K	L	K	E	N	I	A	Q	H	G	A	D	N	I	V	A	I	V	S	T	V	T	C	N	S	A	G	G	Q	P	V	S	M
Template Known Secondary structure							S	S												T	T							B		G	G	G	G		T	T	S			T	T	T	T		B														G	G	G								S	S	B	T	T	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.															.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																														.
Template Sequence		S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A	L	T	M	S	.	A	K	D	P	L	L	N	I	G	G	L	V	A	I	R	D	N	E	E
Template Known Secondary structure															T								T	T													G	G	G	T	T											G	G	G		S						.							S	S							S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	G	G	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D	R	L	R	E	A	.	G	I	P	I	Q	Y
Template Known Secondary structure														T		S	T	T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T																						T	.	T			B		S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.															.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	.	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y
Query Conservation																																			.
Alig confidence																																			.								.	.	.	.	.	.																				.	.	.
Template Conservation																																											.	.	.	.	.	.																				.	.	.
Template Sequence		P	T	G	G	H	A	V	F	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	.	.	.	.	.	.	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	.	.	.	D	M	E	F	M	R	L	T	I	A	R
Template Known Secondary structure		S			S	S						S	T	T	T		T	T	S		G	G	G																				.	.	.	.	.	.			S						B		T	T	T		S	B				.	.	.	S										T
Template Predicted Secondary structure																																											.	.	.	.	.	.																				.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.				.	410	.	.	.	.	.	.	.	.	.
		358	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		N	L	.	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L	K
Template Known Secondary structure		T	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions