Job Description P27833 Confidence 99.95% Date Thu Jan 5 11:44:10 GMT 2012 Rank 106 Aligned Residues 311 % Identity 14% Template c3op7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution Resolution 1.70 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																					.	.	.
Query SS confidence															.																					.	.	.
Query Sequence		L	D	Y	M	Q	S	A	M	G	S	G	K	L	.	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	.	.	.	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V
Query Conservation															.																					.	.	.
Alig confidence															.																					.	.	.																					.
Template Conservation																																																											.
Template Sequence		P	E	D	F	Y	K	K	L	Q	G	T	K	L	N	Y	G	W	I	E	G	S	P	A	F	K	K	S	V	S	Q	L	Y	T	G	V	K	P	E	Q	I	L	Q	T	N	G	A	T	G	A	N	L	L	V	L	Y	S	L	.	I	E	P	G	D	H	V	I	S	L	Y	P	T	Y	Q	Q	L	Y	D	I	P	K
Template Known Secondary structure											T	S			S	S			T	T											T	T	S	S	S			G	G	G					S														.			T	T								S	S		T
Template Predicted Secondary structure																																																											.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																.																												.	.	.	.	.	.
Query SS confidence																.																												.	.	.	.	.	.
Query Sequence		L	R	G	A	K	I	V	F	V	D	V	R	P	D	.	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	.	.	.	.	.	.	V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K
Query Conservation																.																												.	.	.	.	.	.
Alig confidence																.																												.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	G	A	E	V	D	L	W	Q	I	E	E	E	N	G	W	L	P	D	L	E	K	L	R	Q	L	I	R	P	T	T	K	X	I	C	I	N	N	A	N	N	P	T	G	A	V	X	D	R	T	Y	L	E	E	L	V	E	I	A	S	E	V	G	A	Y	I	L	S	D	E	V	Y	R	S	F	S	E	L	D
Template Known Secondary structure			T	T										G	G	G	T	T													T	T								S	S		T	T	T																		T	T	T									S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	S	I	I	E	V	Y	D	K	G	I	A	V	N	S	L	S	T	Y	S	L	P	G	I	R	I	G	W	V	A	A	N	H	Q	V	T	D	I	L	R	D	Y	R	D	Y	T	X	I	C	A	G	V	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	A	Q	L	A
Template Known Secondary structure										T	T											S		G	G	G																T	T	T	G	G	G	T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																			.	.	260	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	.	L	K	E	A	E	I	M	A	V	F	H	Y
Query Conservation																																																																					.
Alig confidence																																									.	.	.	.	.	.	.	.																					.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		L	A	H	Y	Q	E	I	L	E	R	N	R	H	I	L	E	E	N	L	A	I	L	D	Q	W	I	E	E	E	P	L	V	S	Y	I	R	P	A	V	.	.	.	.	.	.	.	.	V	S	T	S	F	V	K	I	A	V	D	X	P	X	E	D	F	C	L	Q	L	L	Q	E	H	G	V	L	L	V	P	G	N
Template Known Secondary structure				T																											T	T							S	S	.	.	.	.	.	.	.	.	S	S									S	S																				G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Sequence		R	F	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	Y	V	R	L	G	F	A	.	.	C	E	Q	E	T	L	I	K	G	L	E	K	L	S	Q	F	L
Template Known Secondary structure		G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								.	.	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		338	.	340	.																							.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions