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Job DescriptionP27833
Confidence99.92%DateThu Jan 5 11:44:10 GMT 2012
Rank162Aligned Residues315
% Identity15%Templatec3nx3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (argd) from2 campylobacter jejuni
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30 .........40.........50.........60........ .70.........80
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Query Sequence  GTELDYMQSAMGSGKLCGDG. . . GFTRRCQQWLEQRFGSAKVLLTPSCTASLEMAALLLDI. . . . . . . QPGDEVIMPSYT
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Template Sequence  AKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAXKTARKYAFNKGVKGGQFIAFKHSF
Template Known Secondary structure  TT
S


TTS

T
SSSTT
TT
TT

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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   81........90.........100..... ....110.........120.... .....130.... .....140.......
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Query Sequence  FVSTANAFVLRGAKIVFVDVRPDTM. . . . . . NIDETLIEAAITDKTRVIV. . . PVHYAGVACE. . . . MDTIMALAKKHNL
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Template Sequence  HGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDI
Template Known Secondary structure 

SSTT


GGG
S

S

TT
TT

TTS
TTS


T
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   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  FVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWR
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Template Sequence  LLIADEIQCGXGRSGKFFAYEHAQILPDIXTSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAG. . . . . .
Template Known Secondary structure 
TTTTTTTTSSSSGGGGGT


S
GGGTTTS


S
TT

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BS

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   215....220.........230.........240.........250.........260.........270.........280........
 
   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  DIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDIDDRSALI
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Template Sequence  . . . . . . . . . VNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLG. . . . . . . . . FXQGLSLDKSVKVAKVI
Template Known Secondary structure  .........TT
TTT.........T
TTS
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   289290.........300.........310.........320.........330... ......340.........350
 
   308.310.........320.........330.........340.........350.........360.........370.....
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Query Sequence  NFLKEAEIMAVFHYIPLHGCPAGEHFGEFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYF
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Template Sequence  QKCQENALLLISC. . . . . . . . . . . . . . . . . . . . . . . . . . GENDLRFLPPLILQKEHIDEXSEKLRKAL
Template Known Secondary structure  TT
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TT

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   351........360... ......370.........380.........390..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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