Job Description P27833 Confidence 99.81% Date Thu Jan 5 11:44:10 GMT 2012 Rank 223 Aligned Residues 308 % Identity 12% Template c3l44A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1; PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase Resolution 2.05 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																.																							.																					.
Query SS confidence																.																							.																					.
Query Sequence		G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	.	K	L	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	.	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	.	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A
Query Conservation																.																							.																					.
Alig confidence																.																							.																					.
Template Conservation
Template Sequence		P	H	I	T	K	A	I	T	T	A	A	E	N	G	V	L	Y	G	T	P	T	A	L	E	V	K	F	A	K	X	L	K	E	A	X	P	A	L	D	K	V	R	F	V	N	S	G	T	E	A	V	X	T	T	I	R	V	A	R	A	Y	T	G	R	T	K	I	X	K	F	A	G	C	Y	H	G	H	S	D	L
Template Known Secondary structure																S			S	S																	T	T		S						S	S																									T	T					S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		88	.	90	.	.	.	.	.														.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query Sequence		F	V	L	R	G	A	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	.	.	.	.	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation
Template Sequence		V	L	V	A	L	G	T	P	D	S	A	G	V	P	Q	S	I	A	Q	E	V	I	T	V	P	F	N	N	V	E	T	L	K	E	A	L	D	K	W	G	H	E	V	A	A	I	L	V	E	P	I	V	G	N	F	G	I	V	E	P	K	P	G	F	L	E	K	V	N	E	L	V	H	E	A	G	A	L	V	I
Template Known Secondary structure		G	G	B					B	S	S	T	T							T	T						T	T													G	G	G								S	S	B		T	T	S		B				T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G
Query Conservation
Alig confidence										.																							.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																							.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	E	V	I	T	A	F	.	R	F	X	Y	G	G	A	Q	D	L	L	G	V	T	P	D	L	T	A	L	G	V	.	I	G	G	G	L	P	I	G	A	Y	G	G	K	K	E	I	X	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	A	P	L	G	P	A	Y	Q	A
Template Known Secondary structure					T	T	T	T	T	.	T	S	S	S	S							T				S							.	T	T	T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B	T	T	T	S	S	B
Template Predicted Secondary structure										.																							.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																				.	290	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																																							.	.
Query SS confidence																				.	.	.	.	.	.																																																							.	.
Query Sequence		S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	.	.	.	.	.	.	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	.	.
Query Conservation																				.	.	.	.	.	.																																																							.	.
Alig confidence																				.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		G	T	X	A	G	N	P	A	S	X	A	S	G	I	A	C	L	E	V	L	Q	Q	E	G	L	Y	E	K	L	D	E	L	G	A	T	L	E	K	G	I	L	E	Q	A	A	K	H	N	I	D	I	T	L	N	R	L	K	.	.	.	.	.	.	.	.	.	G	A	L	T	V	Y	F	T	T	N	T	I	E	D
Template Known Secondary structure			T	T	T	T																T	S	T	T																							T	T									T	.	.	.	.	.	.	.	.	.	T							S	S	S				S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.										.	.	360	.	.	.	.	.	.	.	.	.	370	.
													303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	A	A	Q	D	T	D	G	E	X	F	G	K	F	F	K	L	X	L	Q	E	G	V	N	L	A	P	S	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	W	F	L	T	T	E	H	T	K	E	D	I	E	Y	T	I	E	A	V
Template Known Secondary structure								S															T	T					S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.																													.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		372	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	Y	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	A	F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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