Job Description P27833 Confidence 99.89% Date Thu Jan 5 11:44:10 GMT 2012 Rank 200 Aligned Residues 311 % Identity 11% Template c3i4jC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans Resolution 1.70 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																		.	.																			.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																		.	.																			.	.	.	.	.	.	.
Query Sequence		G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	.	.	.	.	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	.	.	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	.	.	.	.	.	.	.	L	D	I	Q	P	G	D	E	V	I	M	P
Query Conservation																						.	.	.	.																		.	.																			.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																		.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	V	G	E	R	M	A	A	Q	A	A	R	L	P	F	V	H	G	S	Q	F	S	S	D	V	L	E	E	Y	A	G	R	L	A	R	F	V	G	L	P	T	F	R	F	W	A	V	S	G	G	S	E	A	T	E	S	A	V	K	L	A	R	Q	Y	H	V	E	R	G	E	P	G	R	F	K	V	I	T	R
Template Known Secondary structure																				T	T	T																	T	T		T	T							S	S																			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.									.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	.	.	.	.	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	.	.	.	.	.	.	.	.	M	D	T	I	M	A	L	A	K	K	H
Query Conservation																																									.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	S	R	E	L	Y	T	P	L	M	R	P	E	A	W	P	K	L	P	K	P	D	P	A	R	N	G	A	E	D	A	E	G	L	R	A	L	L	E	R	E	G	P	E	T	V	A	A	F	M	A	E	P	V	V	G	A	S	D	A	A	L	A	P	A	P	G	Y	Y	E	R	V	R	D	I	C	D	E	A
Template Known Secondary structure		T	T			T	T	T	G	G	G	G	S	G	G	G									T	T	S							T											G	G	G								S	S			G	G	G	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		N	L	F	V	V	E	D	A	A	Q	G	.	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y
Query Conservation													.
Alig confidence													.																																																																		.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	I	I	F	I	A	D	E	V	M	S	G	M	G	R	C	G	S	P	L	A	L	S	R	W	S	G	V	T	P	D	I	A	V	L	G	K	G	L	A	A	G	Y	A	P	L	A	G	L	L	A	A	P	Q	V	Y	E	T	V	M	G	G	F	M	H	G	F	T	Y	A	G	H	P	V	S	V	A	.	.	.
Template Known Secondary structure		T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	T				S						G	G	G	T	T	T	S	S																								T	T	T	T							.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	G	L	S	V	L	D	I	V	E	R	E	D	L	T	G	A	A	K	E	R	G	A	Q	L	L	A	G	L	Q	A	L	Q	A	R	F	P	Q	M	M	Q	V	R	G	T	G	.	.	.	.	.	.	.	.	.	.	L	L	L	G	V	V	L	G	D	L	I	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.												T	T																								T	T								T	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
													305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350											.	.	.	.	.	.	.	.	.	360	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	G	A	A	A	L	K	R	G	L	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	H	L	L	L	G	P	P	L	S	I	T	A	A	E	V	D	G	L	L	A	L	L	A	G	A	L
Template Known Secondary structure											T	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.																															.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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