Job Description P27833 Confidence 99.81% Date Thu Jan 5 11:44:10 GMT 2012 Rank 225 Aligned Residues 263 % Identity 17% Template c3hvyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:cystathionine beta-lyase family protein, ynbb b.subtilis PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_348457.1) from clostridium acetobutylicum at3 2.00 a resolution Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	K	L	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	K	V	L	L	.	.	.	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																						.	.	.																.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																								.
Template Sequence		S	G	Y	G	Y	N	D	.	I	G	R	D	S	L	D	R	V	Y	A	N	I	F	N	T	E	S	A	F	V	R	P	H	F	V	N	G	T	H	A	I	G	A	A	L	F	G	N	.	L	R	P	N	D	T	X	X	S	I	C	G	X	P	Y	D	T	L	H	D	I	I	G	X	D	D	S	K	K	V	G	S
Template Known Secondary structure			T	T		T	T		.															T		S						T	T		S	S												T	.			T	T						S	S	S	S			G	G	G					T			T	T			S
Template Predicted Secondary structure									.																																								.
Template SS confidence
		66	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
			89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.																													.	.																.	.	.	.	.	.	.																.	.
Query SS confidence		.																													.	.																.	.	.	.	.	.	.																.	.
Query Sequence		.	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	.	.	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	.	.	.	.	.	.	.	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	.	.	L	F	V	V	E	D	A	A	Q	G
Query Conservation		.																													.	.																.	.	.	.	.	.	.																.	.
Alig confidence		.														.	.														.	.																.	.	.	.	.	.	.																.	.
Template Conservation																.	.
Template Sequence		L	R	E	Y	G	V	K	Y	K	X	V	D	L	K	.	.	D	G	K	V	D	I	N	T	V	K	E	E	L	K	K	D	D	S	I	K	L	I	H	I	Q	R	S	T	G	Y	G	W	R	K	S	L	R	I	A	E	I	A	E	I	I	K	S	I	R	E	V	N	E	N	V	I	V	F	V	D	N	C	Y	G
Template Known Secondary structure		T	G	G	G	T									B	.	.	T	T	B														T	T								S	S			S	S	S	S																				S	S	S							T	T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	.	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M
Query Conservation																																		.
Alig confidence				.																				.	.									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																				.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	.	V	E	E	K	E	P	T	D	V	G	A	D	I	I	A	G	S	L	I	.	.	K	N	I	G	G	G	I	A	T	T	G	G	Y	I	A	G	K	E	E	Y	V	T	Q	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	V	T	V	P	G	I	G	G	E	C	G	S
Template Known Secondary structure		T	T	.	T	S	S	S		G	G	G	G	T		S						T	T	.	.	S	G	G	G	T	T	T			S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T	T	G	G	G
Template Predicted Secondary structure				.																				.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																		.	.	270	.	.	.	.	.	.	.	.	.	280	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E
Query Conservation
Alig confidence																																							.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		T	F	G	V	X	R	S	L	Y	E	G	L	F	X	A	P	H	V	T	I	E	A	V	K	G	A	V	F	C	A	R	I	X	E	L	A	G	.	.	.	.	.	F	D	V	L	P	K	Y	N	D	K	R	T	D	I	I	Q	A	I	K	F	N	D	E	K	K	L	I	D	F	I	K	G	I	Q	T	A	S
Template Known Secondary structure			T	T																																		T	.	.	.	.	.					S		T	T	S			S	S	S								S														T
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions