Job Description P27833 Confidence 99.95% Date Thu Jan 5 11:44:10 GMT 2012 Rank 110 Aligned Residues 323 % Identity 14% Template c3hl2D_ PDB info PDB header:transferase Chain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex Resolution 2.81 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.
Predicted Secondary structure																		.	.	.																					.	.							.																												.	.
Query SS confidence																		.	.	.																					.	.							.																												.	.
Query Sequence		F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	.	.	.	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	.	.	I	Q	P	G	D	E	.	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	.	.	R	P	D
Query Conservation																		.	.	.																					.	.							.																												.	.
Alig confidence																		.	.	.																					.	.							.																												.	.
Template Conservation
Template Sequence		I	T	N	S	L	V	L	D	I	I	K	L	A	G	V	H	T	V	A	N	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	I	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D
Template Known Secondary structure															T		T	T								S	S																		T	T																					T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																																														.	.	.
Query SS confidence															.	.	.	.	.	.	.																																														.	.	.
Query Sequence		T	M	N	I	D	E	T	L	I	E	A	A	I	.	.	.	.	.	.	.	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	.	.	.	K	G	R	A	L	G	T	I	G	H	I	G
Query Conservation															.	.	.	.	.	.	.																																														.	.	.
Alig confidence															.	.	.	.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		E	L	R	T	D	L	K	A	V	E	A	K	V	Q	E	L	G	P	D	C	I	L	C	I	H	S	T	T	S	C	F	A	P	R	V	P	D	R	L	E	E	L	A	V	I	C	A	N	Y	D	I	P	H	I	V	N	N	A	Y	G	V	Q	S	S	K	C	M	H	L	I	Q	Q	G	A	R	V	G	R	I	D
Template Known Secondary structure																			G	G	G								S	S			T	T	B																T								T	T		T	T															S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	V	Q	S	L	D	K	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	D	S	F	I	Q	E	I	S	K	M	Y	P	G	R	A	S	A	S	P	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	I	T	L	L	S	L	G	S	N	G	Y	K	K	L
Template Known Secondary structure											S				S	S							S											T	S		S		B		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320																				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	.	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		L	K	E	R	K	E	M	F	S	Y	L	S	N	Q	I	K	K	L	S	E	A	Y	N	E	R	L	L	H	T	P	H	N	P	I	S	L	A	M	T	L	K	T	L	D	E	H	R	D	K	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	V	V	P	L	G	S	M	Q	T	V	S	G	Y
Template Known Secondary structure																							T	T			B				T	T		S	S							T	T			T	T	T	S													T	T			S						S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		T	F	R	G	F	M	S	.	.	H	T	N	N	Y	P	C	A	Y	L	N	A	A	S	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D	R	C	L
Template Known Secondary structure					S	T	T	T	.	.	T	S	S			S	S									T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		418	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions