Job Description P27833 Confidence 99.81% Date Thu Jan 5 11:44:10 GMT 2012 Rank 224 Aligned Residues 264 % Identity 16% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.												.
Predicted Secondary structure																															.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	K	L	C	G	D	G	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	K	V	L	L	.	.	.	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	.	.	.	.	.	.	.	.	.	.	.	F
Query Conservation																															.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																						.	.	.																.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																								.
Template Sequence		T	G	Y	G	Y	D	D	.	E	G	R	D	T	L	E	R	V	Y	A	S	V	F	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	.	L	R	P	G	D	E	L	L	Y	I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L
Template Known Secondary structure			T	T		T	T		.															T		S						T	T	S		S													.			T	T							S	S	S			T	T						T	S	S		S	S	S			T
Template Predicted Secondary structure									.																																								.
Template SS confidence
		51	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.																			.	.
Query SS confidence																																										.	.	.	.	.	.	.																			.	.
Query Sequence		V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	.	.	.	.	.	.	.	A	G	V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	.	.	L	F	V	V	E	D	A	A	Q	G	V	M	S
Query Conservation																																										.	.	.	.	.	.	.																			.	.
Alig confidence															.																											.	.	.	.	.	.	.																			.	.
Template Conservation															.
Template Sequence		K	D	F	Q	I	G	Y	D	A	V	P	L	L	.	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V
Template Known Secondary structure		G	G	G	T										.	T	T	S	S												T	T									S		T	T	S	S	S																				T	T	S							T	T	T	T	T	T
Template Predicted Secondary structure															.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q
Query Conservation
Alig confidence				.																	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	.	I	E	P	T	E	V	G	A	D	I	I	A	G	S	L	I	.	.	N	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S
Template Known Secondary structure		S	S	.			G	G	G	T	T		S								.	.		T	T	T	T	T			S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		T	T	T	G	G	G					T	T
Template Predicted Secondary structure				.																	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E
Query Conservation
Alig confidence																																			.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		L	L	E	X	Y	Q	G	F	F	L	A	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	.	.	.	.	.	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	S	K	D	K	X	I	A	F	A	Q	A	I	Q	A	A	S
Template Known Secondary structure																																	T	T	.	.	.	.	.					S		T	T	S			S	S	S							S															T	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions