Job Description P27833 Confidence 99.97% Date Thu Jan 5 11:44:10 GMT 2012 Rank 54 Aligned Residues 325 % Identity 15% Template c3f9tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution Resolution 2.11 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	.	.	.	.	.	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	G	S	A	.	.	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																		.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	X	C	S	N	V	L	P	I	T	R	K	I	V	D	I	F	L	E	T	N	L	G	D	P	G	L	F	K	G	T	K	L	L	E	E	K	A	V	A	L	L	G	S	L	L	N	N	K	D	A	Y	G	H	I	V	S	G	G	T	E	A	N	L	X	A	L	R	C	I	K	N	I	W	R	E	K	R	R	K
Template Known Secondary structure			S						T										T	T			T	T	S	G	G	G																			T	T		T	T							S																							T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
				67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.																																																						.	.	.	.
Query SS confidence		.	.																																																						.	.	.	.
Query Sequence		.	.	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	.	.	.	.	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D	T	I	M	A
Query Conservation		.	.																																																						.	.	.	.
Alig confidence		.	.																																						.																.	.	.	.
Template Conservation																																									.
Template Sequence		G	L	S	K	N	E	H	P	K	I	I	V	P	I	T	A	H	F	S	F	E	K	G	R	E	X	X	D	L	E	Y	I	Y	A	P	I	K	E	D	.	Y	T	I	D	E	K	F	V	K	D	A	V	E	D	Y	D	V	D	G	I	I	G	I	A	G	T	T	E	L	G	T	I	D	N	I	E	E	L	S	K
Template Known Secondary structure		T					S	S							T	T			T										T								B		T	T	.	S	S	B												S									B	S		T	T	T			B
Template Predicted Secondary structure																																									.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170											.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	.	.	.	.	.	.	.	.	.	.	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G
Query Conservation																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	K	E	N	N	I	Y	I	H	V	D	A	A	F	G	G	L	V	I	P	F	L	D	D	K	Y	K	K	K	G	V	N	Y	K	F	D	F	S	L	G	V	D	S	I	T	I	D	P	H	K	X	G	H	C	P	I	P	S	G	G	I	L	F	K	D	I	G	Y	K	R	Y	L	D	V	D	A	P	Y	L
Template Known Secondary structure							T								T	T	G	G	G	T	G	G	G			G	G	G			T	T						S	G	G	G	T		S						T	T	T	T	T				S	S							S	S	G	G	G	G	G	G	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																																																	.												.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.																																																	.												.	.	.	.	.	.	.
Template Sequence		T	E	T	R	Q	.	.	.	.	.	.	.	.	A	T	I	L	G	T	R	V	G	F	G	G	A	C	T	Y	A	V	L	R	Y	L	G	R	E	G	Q	R	K	I	V	N	E	C	X	E	N	T	L	Y	L	Y	K	K	L	K	E	N	.	N	F	K	P	V	I	E	P	I	L	N	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S			.	.	.	.	.	.	.	.		S	S		S	S			S																																							T	.	T			B	S	S			S	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																																																	.												.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.									280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T
Query Conservation
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	I	V	A	I	E	D	E	D	Y	K	E	V	C	K	K	L	R	D	R	G	I	Y	V	S	V	C	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	A	L	R	I	V	V	X	P	H	I	K	R	E	H	I	D	N	F	I	E	I
Template Known Secondary structure		.	.	.	.							T	T											T	T		B					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T
Template Predicted Secondary structure		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.																										.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		371	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions