Job Description P27833 Confidence 99.78% Date Thu Jan 5 11:44:10 GMT 2012 Rank 229 Aligned Residues 280 % Identity 12% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		34	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																															.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.																															.	.	.	.
Query Sequence		R	R	C	Q	Q	W	L	E	Q	R	.	.	.	.	.	.	.	.	F	G	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	.	.	.	.	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R
Query Conservation												.	.	.	.	.	.	.	.																															.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																								.							.	.	.	.
Template Conservation																																											.
Template Sequence		P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	V	V	G	T	G	S	T	Q	L	C	Q	A	A	V	H	A	L	.	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D
Template Known Secondary structure																	S	B			T	T	S																				.				S	S	S	S	S							S	S											T	T			T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	H	I	G	C	F	S	F	H	E	T	K
Query Conservation
Alig confidence			.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation			.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		A	.	.	.	.	.	.	.	W	G	F	D	K	K	G	P	Y	I	E	L	V	T	S	P	N	N	P	D	G	T	I	R	E	.	.	.	.	.	.	.	.	.	T	V	V	A	K	V	I	H	D	F	A	Y	Y	W	P	H	Y	T	.	.	.	P	I	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K
Template Known Secondary structure		S	.	.	.	.	.	.	.	T	T				S	S								S	S		T	T	T						.	.	.	.	.	.	.	.	.											T	T		S	T	T	T	S	.	.	.				S		B			S
Template Predicted Secondary structure			.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		182	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.												.	.	.
Predicted Secondary structure					.																																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	T	.	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D	I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	.	.	.	.	.	.	.	.	.	.	.	L	E	A
Query Conservation					.																																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V	A	K	K	M	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T	C	K	S	E	S	E	S	E	N	F
Template Known Secondary structure						G	G	G																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S																					T			S	T	T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		A	D	R	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	.	.	A	G	R	I	E	L	P	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R	D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C
Query Conservation																										.	.
Alig confidence																										.	.																																																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V	V	K	E	S	D	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y	F	G	K	S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	L	V	S	E	L	R	R	H	K	V	M	S	R	A	G	.	.	.	.	.	.	.
Template Known Secondary structure																						T	S	S	S												T	T	T	T								S							S	S	S									T	T	T						T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	C	G	S	D	K	K	H	V	R	V	S	M	L	.	.	S	R	E	D	V	F	N	V	F	L	E	R	L	A	N	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	S		T	T						S		.	.	S															T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
																353	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions