Job Description P27833 Confidence 99.83% Date Thu Jan 5 11:44:10 GMT 2012 Rank 221 Aligned Residues 316 % Identity 12% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																						.															.																					.	.
Query SS confidence																						.															.																					.	.
Query Sequence		G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	.	G	F	T	R	R	C	Q	Q	W	L	E	Q	R	F	.	G	S	A	K	V	L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	.	.	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N
Query Conservation																						.															.																					.	.
Alig confidence																						.															.																					.	.
Template Conservation
Template Sequence		P	R	V	L	E	A	V	E	E	A	L	A	R	G	W	L	Y	G	A	P	G	E	A	E	V	L	L	A	E	K	I	L	G	Y	V	K	R	G	G	M	I	R	F	V	N	S	G	T	E	A	T	M	T	A	I	R	L	A	R	G	Y	T	G	R	D	L	I	L	K	F	D	G	C	Y	H	G	S	H	D	A
Template Known Secondary structure													T	T		S			S	S			S															T	T							S	S																										T					S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		87	.	.	90	.	.	.	.														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Query Sequence		A	F	V	L	R	G	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A	G	V	A	C	E	.	.	.	.	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation
Template Sequence		V	L	V	A	A	G	G	V	P	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	D	V	E	A	L	E	R	V	F	A	E	Y	G	D	R	I	A	G	V	I	V	E	P	V	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E	S	G	A	L	L
Template Known Secondary structure		G	S								S	S	T	T							T	T						T	T													G	G	G								S	S	B		S	S	S		B																		T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	E	D	A	A	Q	G	V	M	S	T	Y	K	G	R	A	L	G	T	I	G	.	H	I	G	C	F	S	F	H	E	T	K	N	Y	T	A	G	G	E	G	G	A	T	L	I	N	D	K	A	L	I	E	R	A	E	I	I	R	E	K	G	T	N	R	S	Q	F	F	R	G	Q	V	D	K	Y	T	W	R	D
Query Conservation																							.
Alig confidence																							.									.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	D	E	V	V	T	G	F	R	L	G	L	E	G	A	Q	G	Y	F	N	I	E	G	D	I	I	V	L	G	.	.	K	I	I	G	G	G	F	P	V	G	A	V	A	G	S	R	E	V	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	T	P	Q	G	K	V	F
Template Known Secondary structure						T	T	T	T	T	T	S	S	T	T							T				S						.	.	G	G	G	G	T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B	T	T	T	S	S	B
Template Predicted Secondary structure																																.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																				.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																													.	.	.	.	.	.	.	.
Query SS confidence																										.	.																													.	.	.	.	.	.	.	.
Query Sequence		I	G	S	S	Y	L	M	S	D	L	Q	A	A	Y	L	W	A	Q	L	E	A	A	D	R	.	.	I	N	Q	Q	R	L	A	L	W	Q	N	Y	Y	D	A	L	A	P	L	A	K	A	G	R	I	E	L	P	.	.	.	.	.	.	.	.	S	I	P	D	G	C	V	Q	N	A	H	M	F	Y	I	K	L	R
Query Conservation																										.	.																													.	.	.	.	.	.	.	.
Alig confidence																										.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	G	T	F	N	A	H	P	I	T	M	A	A	G	L	A	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E	A	A	K	A	L	E	E	A	A	S	E	V	L	D	R	T	G	L	P	Y	T	I	N	R	V	E	S	M	M	Q	L	F	I	G	V	E	E	V	S	N	A	A	Q	A	R	K	A
Template Known Secondary structure					T	T	T	T																		S																						T	T	S	S									T	T							T		S			S	S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	D	R	S	A	L	I	N	F	L	K	E	A	E	I	M	A	V	F	H	Y	I	P	L	H	G	C	P	A	G	E	H	F	G	E	F	H	G	E	D	R	Y	T	T	K	E	S	E	R	L	L	R	L	P	L	F	Y	N	L	S	P	V	N	Q	R	T	V	I	A	T	L	L	N	Y	F
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	K	F	Y	V	K	L	H	E	E	M	L	R	R	G	V	F	I	A	P	S	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	V	F	T	G	L	P	H	Q	G	E	A	L	E	I	A	V	E	G	L	R	S	S	L
Template Known Secondary structure																T	T					S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.																													.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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