Job Description P27833 Confidence 65.27% Date Thu Jan 5 11:44:10 GMT 2012
Rank 248 Aligned Residues 112
% Identity 14% Template c2gn0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: threonine dehydratase catabolic;
PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation)
Resolution 1.70 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
39 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
W L E Q R F G S A K V L L T P S C T A S L E M A A L L L D I Q P G D E V I M P S Y T F V S T A N A F V L R G A K I V F V D V R P D T M N I D E T L I E A A I T .
Query Conservation  
                                                                                                                          .
Alig confidence  
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Template Conservation  
                                                                                                                       
Template Sequence  
S L T E A E K R K G V V A C S A G N H A Q G V S L S C A M L G I D G K V V M P K G A P K S K V A A T C D Y S A E V V L H G D N F N D T I A K V S E I V E T E G R
Template Known Secondary structure  
S T S S T T T S S S S
Template Predicted Secondary structure  
Template SS confidence  
   
68 . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . .
 
   
118 . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
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D K T R V I V P V H Y A G V A C E M D T I M A L A K K H N L F V V
Query Conservation  
.                                                        
Alig confidence  
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Template Conservation  
                                               
Template Sequence  
I F I P P Y D D P K V I A G Q G T I G L E I M E D L Y D V D N V I V
Template Known Secondary structure  
S S S S T T
Template Predicted Secondary structure  
Template SS confidence  
   
148 . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]