Job Description P27833 Confidence 56.00% Date Thu Jan 5 11:44:10 GMT 2012 Rank 267 Aligned Residues 141 % Identity 15% Template c1gpjA_ PDB info PDB header:reductase Chain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																													.	.	40	.	.	.	.	.	.				.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		M	I	P	F	N	A	P	P	V	V	G	T	E	L	D	Y	M	Q	S	A	M	G	S	G	K	L	C	G	D	G	G	F	T	R	R	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	L	E	Q	R	F	G	S	.	.	.	A	K	V
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence					.																							.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation					.																							.	.	.
Template Sequence		M	M	V	.	G	E	Q	E	I	L	R	Q	V	K	K	A	Y	D	R	A	A	R	L	G	T	L	.	.	.	D	E	A	L	K	I	V	F	R	R	A	I	N	L	G	K	R	A	R	E	E	T	R	I	S	E	G	A	V	S	I	G	S	A	A	V	E	L	A	E	R	E	L	G	S	L	H	D	K	T	V
Template Known Secondary structure		S	S	T	.	T																			T			.	.	.																						S	S	T	T		S			S														S			T	T
Template Predicted Secondary structure					.																							.	.	.
Template SS confidence
		95	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	P	S	C	T	A	S	L	E	M	A	A	L	L	L	D	I	Q	P	G	D	E	V	I	M	P	S	Y	T	F	V	S	T	A	N	A	F	V	L	R	G	A	K	I	V	F	V	D	V	R	P	D	T	M	N	I	D	E	T	L	I	E	A	A	I	T	D	K	T	R	V	I	V	P	V	H	Y	A
Query Conservation
Alig confidence											.																																									.	.	.	.	.	.	.	.
Template Conservation											.																																									.	.	.	.	.	.	.	.
Template Sequence		L	V	V	G	A	G	E	M	G	.	K	T	V	A	K	S	L	V	D	R	G	V	R	A	V	L	V	A	N	R	T	Y	E	R	A	V	E	L	A	R	D	L	G	G	E	A	V	R	F	D	.	.	.	.	.	.	.	.	E	L	V	D	H	L	A	R	S	D	V	V	V	S	A	T	A	A	P	H	P	V
Template Known Secondary structure					S						.													S							S	S												T						G	G	.	.	.	.	.	.	.	.	G							T		S							S	S	S	S
Template Predicted Secondary structure											.																																									.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	C	E	M	D	T	I	M	A	L	A	K	K	H	N	L	F	V	V	E	D	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	H	V	D	D	V	R	E	A	L	R	K	R	D	R	R	S	P	I	L	I	I	D	I	A
Template Known Secondary structure		B													S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions