Job Description P77316 Confidence 100.00% Date Thu Jan 5 12:27:40 GMT 2012 Rank 11 Aligned Residues 362 % Identity 21% Template c3cosD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 4; PDBTitle: crystal structure of human class ii alcohol dehydrogenase (adh4) in2 complex with nad and zn Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		M	K	A	L	T	Y	H	G	P	H	H	.	V	Q	V	E	N	V	P	D	P	G	V	E	Q	A	D	D	I	I	L	R	I	T	A	T	A	I	C	G	S	D	L	H	L	Y	R	G	K	I	P	Q	V	K	H	G	D	I	F	G	H	E	F	M	G	E	V	V	E	T	G	K	D	V	K	N	L	Q	K	G
Query Conservation													.
Alig confidence													.											.
Template Conservation																								.
Template Sequence		C	K	A	A	I	A	W	E	A	G	K	P	L	C	I	E	E	V	E	V	A	P	.	P	K	A	H	E	V	R	I	Q	I	I	A	T	S	L	C	H	T	D	A	T	V	I	D	S	K	F	E	G	L	A	F	P	V	I	V	G	H	E	A	A	G	I	V	E	S	I	G	P	G	V	T	N	V	K	P	G
Template Known Secondary structure							B		S	T	T	S												.			T	T																			T	S	T	T			S			S	S	B															T	T			S			T	T
Template Predicted Secondary structure																								.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		D	R	V	V	I	P	F	V	I	A	C	G	D	C	F	F	C	R	L	Q	Q	Y	A	A	C	E	N	T	N	A	G	K	G	A	.	.	.	A	L	N	K	K	Q	I	P	A	P	A	A	L	F	G	Y	S	H	L	Y	G	G	V	P	G	G	Q	A	E	Y	V	R	V	P	K	G	N	V	G	P	F	K	V
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.																																							.	.
Template Conservation																																																																													.	.
Template Sequence		D	K	V	I	P	L	Y	A	P	L	C	R	K	C	K	F	C	L	S	P	L	T	N	L	C	G	K	I	S	N	L	K	S	P	A	S	D	Q	Q	L	M	E	D	K	T	S	R	F	T	C	K	G	K	P	V	Y	H	F	F	G	T	S	T	F	S	Q	Y	T	V	V	S	D	I	N	L	.	.	A	K	I
Template Known Secondary structure								S	S				S	S	S	T	T	T	T		T	T					T	T					S		G	G	G	S		S	S		T	T	S			S				T	T				B		S	T	T	T		T	T	B	S						T	T	S		.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		P	P	L	L	S	D	D	K	A	L	F	L	S	D	I	L	P	T	A	W	Q	A	A	K	N	A	Q	I	Q	Q	G	S	S	V	A	V	Y	.	G	A	G	P	V	G	L	L	T	I	A	C	A	R	L	L	G	A	E	Q	I	F	V	V	D	H	H	P	Y	R	L	H	F	A	A	D	R	Y	G	A	I	P
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		D	D	D	A	N	L	E	R	V	C	L	L	G	C	G	F	S	T	G	Y	G	A	A	I	N	N	A	K	V	T	P	G	S	T	C	A	V	F	G	L	G	G	V	G	L	S	A	V	M	G	C	K	A	A	G	A	S	R	I	I	G	I	D	I	N	S	E	K	F	V	K	A	K	A	L	G	A	T	D	C
Template Known Secondary structure			T	T							G	G	G	G	T											T	T	T				T	T									S													T	T		S							S		G	G	G							T	T		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	F	D	E	D	S	D	P	A	Q	S	I	I	E	Q	T	A	G	H	R	G	V	D	A	V	I	D	A	V	G	F	E	A	K	G	S	T	T	E	T	V	L	T	N	L	K	L	E	G	S	S	G	K	A	L	R	Q	C	I	A	A	V	R	R	G	G	I	V	S	V	P	G	V	Y	A	G	F	I	H
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	P	R	D	L	H	K	P	I	Q	E	V	I	I	E	L	T	K	G	G	V	D	F	A	L	D	C	A	G	G	S	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	A	A	L	D	C	T	T	A	G	W	G	S	C	T	F	I	G	V	A	A	G	S	K	G
Template Known Secondary structure				G	G	G		S	S											T	S		B	S						S		S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	B		T	T	T										T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		G	F	L	F	G	D	A	F	D	K	G	L	S	F	K	M	G	Q	T	H	V	.	.	.	H	A	W	L	G	E	L	L	P	L	I	E	K	G	L	L	K	P	E	E	I	V	T	H	Y	M	P	F	E	E	A	A	R	G	Y	E	I	F	E	K	R	E	E	E	C	R	K	V	I	L
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																													.
Template Conservation																																																																						.
Template Sequence		L	T	V	F	P	E	E	L	I	I	G	R	T	I	N	G	T	F	F	G	G	W	K	S	V	D	S	I	P	K	L	V	T	D	Y	K	N	K	K	F	N	L	D	A	L	V	T	H	T	L	P	F	D	K	I	S	E	A	F	D	L	M	N	Q	G	K	S	I	.	R	T	I	L	I
Template Known Secondary structure						T					T	T							S	G	G	G																T	T	S	S		S	G	G	G							G	G	G										T	T			S	.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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