Phyre 2 alignment of P77316 with c2w4qA

Job Description P77316
Confidence 100.00% Date Thu Jan 5 12:27:40 GMT 2012

Rank 55 Aligned Residues 320

% Identity 14% Template c2w4qA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:prostaglandin reductase 2; PDBTitle: crystal structure of human zinc-binding alcohol2 dehydrogenase 1 (zadh1) in ternary complex with nadp and3 18beta-glycyrrhetinic acid

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.										.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																													.																.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																													.																.	.
Query Sequence	M	K	A	L	T	Y	H	G	.	.	.	.	.	.	.	.	.	P	H	H	V	Q	V	E	N	V	P	D	P	G	V	E	Q	A	D	D	I	I	L	R	I	T	A	T	A	I	C	G	S	D	L	H	L	Y	R	G	K	I	P	Q	V	.	K	H	G	D	I	F	G	H	E	F	M	G	E	V	V	.	.	E
Query Conservation									.	.	.	.	.	.	.	.	.																																													.																.	.
Alig confidence									.	.	.	.	.	.	.	.	.																																													.																.	.
Template Conservation
Template Sequence	V	Q	R	V	V	L	N	S	R	P	G	K	N	G	N	P	V	A	E	N	F	R	M	E	E	V	Y	L	P	D	N	I	N	E	G	Q	V	Q	V	R	T	L	Y	L	S	V	D	P	Y	M	R	C	R	M	N	E	D	T	G	T	D	Y	I	T	P	W	Q	L	S	Q	V	V	D	G	G	G	I	G	I	I
Template Known Secondary structure												T	T	S				G	G	G										S				T	T													T	T					T	S	S			S	S	T	T	S					B	T	S	B
Template Predicted Secondary structure
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

	69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	T	G	K	D	V	K	N	L	Q	K	G	D	R	V	V	I	P	F	V	I	A	C	G	D	C	F	F	C	R	L	Q	Q	Y	A	A	C	E	N	T	N	A	G	K	G	A	A	L	N	K	K	Q	I	P	A	P	A	A	L	F	G	Y	S	H	L	Y	G	G	V	P	G	G	Q	A	E	Y	V	R	V	P	K
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	E	S	K	H	T	N	L	T	K	G	D	F	V	T	S	F	Y	W	P	W	Q	T	K	V	I	L	D	G	N	S	L	E	K	V	D	P	Q	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	T	T			T	T										S	B	S						G	G	G						G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

	149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	N	V	G	P	F	K	V	P	P	L	L	S	D	D	K	A	L	F	L	S	D	I	L	P	T	A	W	Q	A	A	K	N	A	Q	I	Q	Q	G	S	S	V	A	V	Y	G	A	G	P	V	G	L	L	T	I	A	C	A	R	L	L	G	A	E	Q	I	F	V	V	D	H	H	P	Y	R	L	H	F	A	A
Query Conservation
Alig confidence	.	.	.	.	.
Template Conservation	.	.	.	.	.
Template Sequence	.	.	.	.	.	D	G	H	L	S	Y	F	L	G	A	I	G	M	P	G	L	T	S	L	I	G	I	Q	E	K	G	H	I	T	A	G	S	N	K	T	M	V	V	S	G	A	A	G	A	C	G	S	V	A	G	Q	I	G	H	F	L	G	C	S	R	V	V	G	I	C	G	T	H	E	K	C	I	L	L	T
Template Known Secondary structure	.	.	.	.	.	T	T		G	G	G	G	G	T	T	T	S														S				T	T								S	S	T	T	B													T	T		S							S
Template Predicted Secondary structure	.	.	.	.	.
Template SS confidence
						123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

	229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	R	Y	G	A	I	P	I	N	F	D	E	D	S	D	P	A	Q	S	I	I	E	Q	T	A	G	H	R	G	V	D	A	V	I	D	A	V	G	F	E	A	K	G	S	T	T	E	T	V	L	T	N	L	K	L	E	G	S	S	G	K	A	L	R	Q	C	I	A	A	V	R	R	G	G	I	V	S	V	P	G
Query Conservation
Alig confidence																								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	S	E	L	G	F	D	A	A	I	N	Y	K	K	D	N	V	A	E	Q	L	R	E	S	.	.	C	P	A	G	V	D	V	Y	F	D	N	V	G	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	D	T	V	I	S	Q	M	N	E	N	S	H	I	I	L	C	G
Template Known Secondary structure		T	S			S					T	T	T	S										.	.		T	T								S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

	309	310	.	.										.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.						.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence	V	Y	A	G	.	.	.	.	.	.	.	.	.	F	I	H	G	F	L	F	G	D	A	F	D	K	G	L	S	F	K	M	G	Q	T	H	V	H	.	.	.	.	.	A	W	L	G	E	L	L	P	L	I	E	K	G	L	L	K	P	E	E	I	V	T	H	Y	M	P	F	E	E	A	A	R	G	Y	E	I	F
Query Conservation					.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																										.	.	.	.	.																		.	.
Template Conservation																																																													.	.
Template Sequence	Q	I	S	Q	Y	N	K	D	V	P	Y	P	P	P	L	S	P	A	I	E	A	I	Q	K	E	R	N	I	T	R	E	R	F	L	V	L	N	Y	K	D	K	F	E	P	G	I	L	Q	L	S	Q	W	F	K	E	G	K	L	K	I	.	.	K	E	T	V	I	N	G	L	E	N	M	G	A	A	F	Q	S	M
Template Known Secondary structure		G	G	G	T	T	S				S	S														T	T								G	G	G	G	G	G	G														T	T		S			.	.								G	G	G
Template Predicted Secondary structure																																																													.	.
Template SS confidence
	255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

	375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	K	R	E	E	E	C	R	K	V	I	L	V	P	G	A	Q
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence	M	T	G	G	N	I	.	G	K	Q	I	V	C	I	S	E	E
Template Known Secondary structure		T	T			S	.	B						S
Template Predicted Secondary structure							.
Template SS confidence
	333	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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