Job Description P77316 Confidence 99.76% Date Thu Jan 5 12:27:40 GMT 2012 Rank 87 Aligned Residues 317 % Identity 15% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		N	V	P	D	P	G	V	E	Q	A	D	D	I	I	L	R	I	T	A	T	A	I	C	G	S	D	L	H	L	Y	R	G	K	I	P	Q	V	K	H	G	D	I	F	G	H	E	F	M	G	E	V	V	E	T	G	K	D	V	K	.	N	L	Q	K	G	D	R	V	V	I	P	F	V	I	A	C	G	D	C	F
Query Conservation																																																													.
Alig confidence																																								.	.	.	.																		.																.	.	.	.	.
Template Conservation																																								.	.	.	.																																		.	.	.	.	.
Template Sequence		P	L	H	Y	A	L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	L	S	P	D	S	.	.	.	.	I	P	G	K	W	L	T	R	D	C	M	L	G	M	E	F	S	G	R	D	A	S	G	R	R	V	M	G	M	V	P	A	E	.	.	.	.	.
Template Known Secondary structure		G	G	G	G				T	T	S	T	T	T																			T	S	S		G	G	G	.	.	.	.			S			S		S	S												T	T									S	S		.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.																																		.	.	.	.	.
Template SS confidence
		1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.					.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	R	L	Q	Q	Y	A	A	C	E	N	T	N	A	G	K	G	A	A	L	N	K	K	Q	I	P	A	P	A	A	L	F	G	Y	S	H	L	Y	G	G	V	P	G	G	Q	A	E	Y	V	R	V	P	K	G	N	V	G	P	F	K	V	P	P	L	L	S	D	D	K	A	L	F	L	S	D	I	L	P	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	T	S	V	L	L	L	Q	H	A	T	.	.	W	E	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	Y	T	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	B	S						G	G	G		.	.					T	T	S						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
																																														1621	.	.	.	.	.	.	.	.	1630	.	.	.			.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.
		175	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure									.																																																						.	.
Query SS confidence									.																																																						.	.
Query Sequence		A	W	Q	A	A	K	N	.	A	Q	I	Q	Q	G	S	S	V	A	V	Y	G	A	G	P	V	G	L	L	T	I	A	C	A	R	L	L	G	A	E	Q	I	F	V	V	D	H	H	P	Y	R	L	H	F	A	A	D	R	Y	G	A	I	.	.	P	I	N	F	D	E	D	S	D	P	A	Q	S	I	I	E	Q
Query Conservation									.																																																						.	.
Alig confidence									.																																																						.	.
Template Conservation
Template Sequence		A	Y	Y	S	L	V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S	G	G	V	G	Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F	T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R
Template Known Secondary structure							T	T	T	T				T	T								S	S	S													T	T								S													T	T			S	T	T				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1655	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	G	H	R	G	V	D	A	V	I	D	A	V	G	F	E	A	K	G	S	T	T	E	T	V	L	T	N	L	K	L	E	G	S	S	G	K	A	L	R	Q	C	I	A	A	V	R	R	G	G	I	V	S	V	P	G	V	Y	A	G	F	I	H	G	F	L	F	G	D	A	F	D	K	G	L	S	F	K	M
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	T	A	G	K	G	V	D	L	V	L	N	S	L	A	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	Q	A	S	V	R	C	L	A	Q	H	G	R	F	L	E	I	G	K	F	D	L	S	N	N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G
Template Known Secondary structure		T	T	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T																	T	T					T	T	G	G	G	G	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1735	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.																						.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.
		332	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	T	H	V	H	.	.	.	.	.	.	.	.	.	A	W	L	G	E	L	L	P	L	I	E	K	G	L	L	K	P	E	E	I	V	T	H	Y	M	P	F	E	E	A	A	R	G	Y	E	I	F	E	K	R	E	E	E	C	R	K	V	I	L	V	P	G	A	Q	S	A	E	A	A	Q	K	A	V	S	G
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																					.	.																				.
Template Conservation																																					.	.																				.
Template Sequence		I	L	L	D	S	L	F	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I	Q	E	G	V	V	Q	P	L	K	C	.	.	T	V	F	P	R	T	K	V	E	A	A	F	R	Y	M	A	Q	G	K	.	H	I	G	K	V	V	I	Q	V	R	E	E	E	Q	G	P	A	P	R	G	L	P	P
Template Known Secondary structure				T					T	S																	T	T	T		S						.	.					S	S	T										T	T		.		S	S						S	S					S	S
Template Predicted Secondary structure																																					.	.																				.
Template SS confidence
		1794	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.			.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.		.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870
		403	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	N	A	M	P	G	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	L	T	G	L	S	K	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1871	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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