Job Description P77316 Confidence 100.00% Date Thu Jan 5 12:27:40 GMT 2012 Rank 39 Aligned Residues 310 % Identity 24% Template c2h6eA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-arabinose 1-dehydrogenase; PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		M	K	A	L	T	Y	H	G	P	H	H	V	Q	V	E	N	V	P	D	P	G	V	E	Q	A	D	D	I	I	L	R	I	T	A	T	A	I	C	G	S	D	L	H	L	Y	R	G	K	I	P	Q	V	.	.	K	H	G	D	I	F	G	H	E	F	M	G	E	V	V	E	T	G	K	D	V	K	N	L	Q	K
Query Conservation																																																						.	.
Alig confidence													.	.	.	.							.																															.	.																			.
Template Conservation													.	.	.	.							.																																																			.
Template Sequence		S	K	A	A	L	L	K	K	F	S	E	.	.	.	.	D	V	N	I	P	E	.	P	Q	G	E	E	V	L	I	R	I	G	G	A	G	V	C	R	T	D	L	R	V	W	K	G	V	E	A	K	Q	G	F	R	L	P	I	I	L	G	H	E	N	A	G	T	I	V	E	V	G	.	E	L	A	K	V	K	K
Template Known Secondary structure				B					S				.	.	.	.							.			T	T																				T	T	S				T	T			S	S																.	T	T					T
Template Predicted Secondary structure													.	.	.	.							.																																																			.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	V	V	I	P	F	V	I	A	C	G	D	C	F	F	C	R	L	Q	Q	Y	A	A	C	E	N	T	N	A	G	K	G	A	A	L	N	K	K	Q	I	P	A	P	A	A	L	F	G	Y	S	H	L	Y	G	G	V	P	G	G	Q	A	E	Y	V	R	V	P	K	G	N	V	G	P	F	K	V	P	P
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		G	D	N	V	V	V	Y	A	T	W	G	D	L	T	C	R	Y	C	R	E	G	K	F	N	I	C	K	N	Q	I	I	P	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	N	G	G	F	S	E	Y	M	L	V	K	S	S	R	W	.	.	L	V	K	L	N
Template Known Secondary structure		T							S		B			S		S	T	T	G	G	G	T		G	G	G		T	T		B		B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B			S	S	B	S					S		G	G	G	.	.					S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		L	L	S	D	D	K	A	L	F	L	S	D	I	L	P	T	A	W	Q	A	A	K	N	.	.	.	.	A	Q	I	Q	Q	G	S	S	V	A	V	Y	G	A	G	P	V	G	L	L	T	I	A	C	A	R	L	L	G	A	E	Q	I	F	V	V	D	H	H	P	Y	R	L	H	F	A	A	D	R	Y	G	A	I
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.
Template Conservation
Template Sequence		S	L	S	P	V	E	A	A	P	L	A	D	A	G	T	T	S	M	G	A	I	R	Q	A	L	P	F	I	S	K	F	A	E	P	V	V	I	V	N	G	I	G	G	L	A	V	Y	T	I	Q	I	L	K	A	L	M	K	N	I	T	I	V	G	I	S	R	S	K	K	H	R	D	F	A	L	E	L	G	A	D
Template Known Secondary structure		S	S						G	G	G	G	T																	T	T		S	S									S															T	T								S												T		S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	N	F	D	E	D	S	D	P	A	Q	S	I	I	E	Q	T	A	G	H	R	G	V	D	A	V	I	D	A	V	G	F	E	A	K	G	S	T	T	E	T	V	L	T	N	L	K	L	E	G	S	S	G	K	A	L	R	Q	C	I	A	A	V	R	R	G	G	I	V	S	V	P	G	V	Y	A	G	F	I
Query Conservation
Alig confidence								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	S	E	M	K	.	.	.	D	A	E	S	L	I	N	K	L	T	D	G	L	G	A	S	I	A	I	D	L	V	G	T	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	Y	N	L	G	K	L	L	A	Q	E	G	A	I	I	L	V	G	M	E	G	K	R	V
Template Known Secondary structure								.	.	.											T	T									S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						S	S
Template Predicted Secondary structure								.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	F	L	F	G	D	A	F	D	K	G	L	S	F	K	M	G	Q	T	H	V	H	A	W	L	G	E	L	L	P	L	I	E	K	G	L	L	K	P	E	E	I	V	T	H	Y	M	P	F	E	E	A
Query Conservation
Alig confidence		.																																								.	.	.
Template Conservation		.																																								.	.	.
Template Sequence		.	S	L	E	A	F	D	T	A	V	W	N	K	K	L	L	G	S	N	Y	G	S	L	N	D	L	E	D	V	V	R	L	S	E	S	G	K	I	K	P	.	.	.	Y	I	I	K	V	P	L	G	R	Q
Template Known Secondary structure		.										T	T								S															T	T	S	S			.	.	.
Template Predicted Secondary structure		.																																								.	.	.
Template SS confidence
			276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions