Job Description P77316 Confidence 100.00% Date Thu Jan 5 12:27:40 GMT 2012 Rank 18 Aligned Residues 339 % Identity 20% Template c2cdaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp Resolution 2.28 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		M	K	A	L	T	Y	H	G	P	H	H	.	V	Q	V	E	N	V	P	D	P	G	V	E	Q	A	D	D	I	I	L	R	I	T	A	T	A	I	C	G	S	D	L	H	L	Y	R	G	K	I	P	Q	V	K	H	G	D	I	F	G	H	E	F	M	G	E	V	V	E	T	G	K	D	V	K	N	L	Q	K	G
Query Conservation													.
Alig confidence													.																																									.																					.	.	.
Template Conservation																																																						.																					.	.	.
Template Sequence		M	K	A	I	I	V	K	P	P	N	A	G	V	Q	V	K	D	V	D	E	K	K	L	D	S	Y	G	K	I	K	I	R	T	I	Y	N	G	I	C	G	T	D	R	E	I	V	N	G	K	L	K	G	.	K	D	F	L	V	L	G	H	E	A	I	G	V	V	E	E	S	Y	H	G	.	.	.	F	S	Q	G
Template Known Secondary structure									T	T	S										G	G	G	S				S	S																			T	T					.		S						S							S	S			S	S	.	.	.			T	T
Template Predicted Secondary structure																																																						.																					.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	V	V	I	P	F	V	I	A	C	G	D	C	F	F	C	R	L	Q	Q	Y	A	A	C	E	N	T	N	A	G	K	G	A	A	L	N	K	K	Q	I	P	A	P	A	A	L	F	G	Y	S	H	L	Y	G	G	V	P	G	G	Q	A	E	Y	V	R	V	P	K	G	N	V	G	P	F	K	V	P	P	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		D	L	V	M	P	V	N	R	R	G	C	G	I	C	R	N	C	L	V	G	R	P	D	F	C	E	T	G	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	G	I	H	K	M	D	G	F	M	R	E	W	W	Y	D	D	P	K	Y	L	.	.	V	K	I	P	K	S
Template Known Secondary structure								S					S	S	S					T	T		G	G	G		S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	B					S		B	S						G	G	G		.	.					G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.
		160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	D	D	K	A	L	F	L	S	D	I	L	.	.	.	.	.	.	.	.	.	.	.	.	P	T	A	W	Q	A	A	K	N	A	Q	I	Q	Q	G	S	S	V	A	V	Y	G	A	G	P	V	G	L	L	T	I	A	C	A	R	L	L	G	A	E	Q	I	F	V	V	D	H	H	P	Y	R	L	H	F	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Conservation																																																																													.	.
Template Sequence		I	E	D	I	G	I	L	A	Q	P	L	A	D	I	E	K	S	I	E	E	I	L	E	V	Q	K	R	V	P	V	W	T	C	D	D	G	T	L	N	C	R	K	V	L	V	V	G	T	G	P	I	G	V	L	F	T	L	L	F	R	T	Y	G	L	E	V	W	M	A	N	R	R	E	P	T	.	.	E	V	E
Template Known Secondary structure		G	T	T	T	G	G	G																		G	G	G	S	S			S		T	T	S	S	S	T	T																						T	T								S	S				.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	R	Y	G	A	I	P	I	N	F	D	E	D	S	D	P	A	Q	S	I	I	E	Q	T	A	G	H	R	G	V	D	A	V	I	D	A	V	G	F	E	A	K	G	S	T	T	E	T	V	L	T	N	L	K	L	E	G	S	S	G	K	A	L	R	Q	C	I	A	A	V	R	R	G	G	I	V	S	V	P
Query Conservation
Alig confidence																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	V	I	E	E	T	K	T	N	Y	Y	N	S	S	N	G	Y	D	K	L	K	D	S	V	.	.	.	G	K	F	D	V	I	I	D	A	T	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	N	I	L	G	N	V	I	P	L	L	G	R	N	G	V	L	G	L	F
Template Known Secondary structure									T							T	T		S							T	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T							G	G	G
Template Predicted Secondary structure																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.																				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.					.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure														.	.	.																																		.	.	.	.
Query SS confidence														.	.	.																																		.	.	.	.
Query Sequence		G	V	Y	A	G	F	I	H	G	F	L	F	.	.	.	G	D	A	F	D	K	G	L	S	F	K	M	G	Q	T	H	V	H	A	W	L	G	E	L	L	P	L	I	E	K	G	L	L	.	.	.	.	K	P	E	E	I	V	T	H	Y	M	P	F	E	E	A	A	R	G	Y	E	I	F	E	K	R	E	E	E
Query Conservation														.	.	.																																		.	.	.	.
Alig confidence														.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		G	F	S	T	S	G	S	V	P	L	D	Y	K	T	L	Q	E	I	V	H	T	N	K	T	I	I	G	L	V	N	G	Q	K	P	H	F	Q	Q	A	V	V	H	L	A	S	W	K	T	L	Y	P	K	A	A	K	M	L	I	T	K	T	V	S	I	N	D	E	K	E	L	L	K	V	L	R	E	K	E	H	G
Template Known Secondary structure		S				B																T	T																												S					T	T	S							T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	K	V	I	L	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	K	I	R	I	L	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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