Phyre 2 alignment of P77316 with c1r37B

Job Description P77316
Confidence 100.00% Date Thu Jan 5 12:27:40 GMT 2012

Rank 26 Aligned Residues 338

% Identity 24% Template c1r37B_

PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase from sulfolobus solfataricus2 complexed with nad(h) and 2-ethoxyethanol

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.																																									.	.	.	.	.	.	.	.
Query SS confidence												.																																									.	.	.	.	.	.	.	.
Query Sequence	M	K	A	L	T	Y	H	G	P	H	H	.	V	Q	V	E	N	V	P	D	P	G	V	E	Q	A	D	D	I	I	L	R	I	T	A	T	A	I	C	G	S	D	L	H	L	Y	R	G	K	I	P	Q	.	.	.	.	.	.	.	.	V	K	H	G	D	I	F	G	H	E	F	M	G	E	V	V	E	T	G	K
Query Conservation												.																																									.	.	.	.	.	.	.	.
Alig confidence												.											.																														.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence	M	R	A	V	R	L	V	E	I	G	K	P	L	S	L	Q	E	I	G	V	P	K	.	P	K	G	P	Q	V	L	I	K	V	E	A	A	G	V	C	H	S	D	V	H	M	R	Q	G	R	F	G	N	L	R	I	V	E	D	L	G	V	K	L	P	V	T	L	G	H	E	I	A	G	K	I	E	E	V	G	D
Template Known Secondary structure								S	T	T	S												.			T	T													T								T			T	T			T	T	T	T	T				S	S																T
Template Predicted Secondary structure																							.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

	72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	V	K	N	L	Q	K	G	D	R	V	V	I	P	F	V	I	A	C	G	D	C	F	F	C	R	L	Q	Q	Y	A	A	C	E	N	T	N	A	G	K	G	A	A	L	N	K	K	Q	I	P	A	P	A	A	L	F	G	Y	S	H	L	Y	G	G	V	P	G	G	Q	A	E	Y	V	R	V	P	K	G	N	V
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	E	V	V	G	Y	S	K	G	D	L	V	A	V	N	P	W	Q	G	E	G	N	C	Y	Y	C	R	I	G	E	E	H	L	C	D	S	P	R	W	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	D	G	A	Y	A	E	Y	V	I	V	P	H	Y	K	Y
Template Known Secondary structure	T			S			T	T												S		S					T	T		G	G	G		S	S				B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B			S	S	B	S					S		G	G	G
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	P	F	K	V	P	P	L	L	S	D	D	K	A	L	F	L	S	D	I	L	P	T	A	W	Q	A	A	K	N	A	Q	I	Q	Q	G	S	S	V	A	V	Y	G	A	G	P	V	G	L	L	T	I	A	C	A	R	L	L	G	A	E	Q	I	F	V	V	D	H	H	P	Y	R	L	H	F	A	A	D	R	Y
Query Conservation
Alig confidence	.	.
Template Conservation	.	.
Template Sequence	.	.	M	Y	K	L	R	R	L	N	A	V	E	A	A	P	L	T	C	S	G	I	T	T	Y	R	A	V	R	K	A	S	L	D	P	T	K	T	L	L	V	V	G	A	G	G	G	L	G	T	M	A	V	Q	I	A	K	A	V	S	G	A	T	I	I	G	V	D	V	R	E	E	A	V	E	A	A	K	R	A
Template Known Secondary structure	.	.					S	S							G	G	G	G	T												T	T			T	T							T	T	T	S														T									S	S										T
Template Predicted Secondary structure	.	.
Template SS confidence
			138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

	232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	A	I	P	I	N	F	D	E	D	S	D	P	A	Q	S	I	I	E	Q	T	A	G	H	R	G	V	D	A	V	I	D	A	V	G	F	E	A	K	G	S	T	T	E	T	V	L	T	N	L	K	L	E	G	S	S	G	K	A	L	R	Q	C	I	A	A	V	R	R	G	G	I	V	S	V	P	G	V	Y	A
Query Conservation
Alig confidence																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	G	A	D	Y	V	I	N	A	S	M	Q	D	P	L	A	E	I	R	R	I	T	E	S	K	G	.	V	D	A	V	I	D	L	N	N	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	S	V	Y	P	K	A	L	A	K	Q	G	K	Y	V	M	V	G	L	F
Template Known Secondary structure	T		S					T	T	T	S										T	T	T	S		.							S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	G	G	G	G													S
Template Predicted Secondary structure																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.																						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

	312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	F	I	H	G	F	L	F	G	D	A	F	D	K	G	L	S	F	K	M	G	Q	T	H	V	H	A	W	L	G	E	L	L	P	L	I	E	K	G	L	L	K	P	E	E	I	V	T	H	Y	M	P	F	E	E	A	A	R	G	Y	E	I	F	E	K	R	E	E	E	C	R	K	V	I	L	V	P
Query Conservation
Alig confidence																																												.	.																									.
Template Conservation																																												.	.																									.
Template Sequence	G	A	D	L	H	Y	H	A	P	L	I	T	L	S	E	I	Q	F	V	G	S	L	V	G	N	Q	S	D	F	L	G	I	M	R	L	A	E	A	G	K	V	K	P	.	.	M	I	T	K	T	M	K	L	E	E	A	N	E	A	I	D	N	L	E	N	F	K	A	I	.	G	R	Q	V	L	I	P
Template Known Secondary structure															T								S															T	T	S				.	.								G	G	G										T	T				.	S
Template Predicted Secondary structure																																												.	.																									.
Template SS confidence
	274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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