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Job DescriptionP77316
Confidence100.00%DateThu Jan 5 12:27:40 GMT 2012
Rank16Aligned Residues343
% Identity23%Templatec1e3jA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadp(h)-dependent ketose reductase; PDBTitle: ketose reductase (sorbitol dehydrogenase) from silverleaf2 whitefly
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50. ........60.........70.......
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Query Sequence  MKALTYHGPHHVQVENVPDPGVEQADDIILRITATAICGSDLHLYRGKIPQ. . . VKHGDIFGHEFMGEVVETGKDVKNLQ
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Template Sequence  LSAVLY. KQNDLRLEQRPIPE. PKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK
Template Known Secondary structure  .TT




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   6...10. ........20..... ....30.........40.........50.........60.........70.........80...
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  KGDRVVIPFVIACGDCFFCRLQQYAACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVP
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Template Sequence  KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC. . . . . . . . . . . . . . . . . . . . . ATPPDDGNLARYYVHAADFC. . HKLP
Template Known Secondary structure  TT




SSSTT
GGG
TT
T.....................TBTTB

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BSGGG..

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   84.....90.........100.........110...... ...120.........130...... ...140
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  PLLSDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVDHHPYRLHFAADRYGAIPIN
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Template Sequence  DNVSLEEGALLEPLSVGVHA. . CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLV
Template Known Secondary structure  TTS
T..T

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   141........150.........160 .........170.........180.........190.........200.........210........
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  FDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTETVLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGF
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Template Sequence  VDPAKEEESSIIERIRSAIGDLPNVTIDCSG. . . . . . . . . . . . . . . . . . NEKCITIGINITRTGGTLMLVGMGSQMVT. V
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TTTS
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   219220.........230.........240......... 250.........260.........270........ .
 
   318.320.........330.........340.........350.........360.........370.........380.........390
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Query Sequence  LFGDAFDKGLSFKMGQTHVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGA
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Template Sequence  PLVNACAREIDIKS. VFRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ
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   280.........290... ......300.........310.........320.........330.........340.........350.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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