Return to main results Retrieve Phyre Job Id

Job DescriptionP71243
Confidence98.73%DateThu Jan 5 12:12:38 GMT 2012
Rank48Aligned Residues389
% Identity10%Templated2vcha1
SCOP infoUDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10...... ...20..... ....30.........40........ .50.........60.........70....
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Query Sequence  VGFFLLKFPLSSET. FVLNQITAF. IDMGFEVEILALQKGDTQNTHAA. . . . . . WTKYNLAARTRWLQDEPTGKVAKLRH
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Template Sequence  VAIIP. . SPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSAQRTVLDLPSSISSVFLPPVDLTDLSSSTRIESRISL
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   910... ......20.........30.........40.........50.........60.........70.........80......
 
   75....80.........90.........100.........110.........120.........130.........140.........
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Query Sequence  RASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVATPFRADVFIAHFGPAGVTAAKLRELGVIRGKIATI. . . . .
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Template Sequence  TVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEP
Template Known Secondary structure  TTTT


S
TT
GGGTT


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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   150.........160.........170.........180.. .......190.........200.........210.
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Query Sequence  . . . . . . . . . . . . . FHGIDISSREVLNHYTPEYQQLFRRGDLMLPIS. . . . . DLWAGRLQKMGCPREKIAVSRMGVDMTRF
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Template Sequence  LMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQ
Template Known Secondary structure  B

TT


B
GGGS
GGGS
TTSGGG
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TTTSS

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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   212..... ..220.........230.........240.........250.........260.........270.........
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Query Sequence  SPRPVK. . . . APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLED. . . . . . . .
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Template Conservation                   
 

 

               
       
                        

      
Template Sequence  EASECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSQTDPLTFLPPGFLER
Template Known Secondary structure 


TS
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TTT



TT




SSTTTTTT


S
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   249250.........260.........270.........280.........290.........300.........310.........320........
 
   280.........290.........300.........310.........320.........330........ .340.........350
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Query Sequence  . . . . VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG. . . . . IPELVEADKSGW
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Template Sequence  TKKRGFVIPFWAPQAQVLAHPSTGGFLTH. . . . . . . . . . . CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAAL
Template Known Secondary structure  TTTTS


STT
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   336...340.........350.........360.... .....370.........380.........390.........400....
 
   351..... ...360.........370.. .......380.........390.........400.....
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Query Sequence  LVPEND. . . . . ARALAQRLAAFSQLDT. . . . . . DELAPVVKRAREKVEHDFNQQVINRELASLLQA
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Template Sequence  RPRAGDDGLVRREEVARVVKGLME. GEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA
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TTS


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   405....410.........420........ .430.........440.........450.........460.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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