Job Description P71243 Confidence 99.96% Date Thu Jan 5 12:12:38 GMT 2012 Rank 26 Aligned Residues 342 % Identity 13% Template d1o6ca_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDP-N-acetylglucosamine 2-epimerase Resolution 2.90

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		M	K	V	G	F	F	L	L	K	F	P	L	S	S	E	T	F	V	L	N	Q	I	T	A	F	I	D	M	G	F	.	E	V	E	I	L	A	L	Q	K	G	D	T	Q	N	T	H	A	A	W	T	K	Y	N	L	A	A	R	T	R	W	L	Q	D	E	P	T	G	K	V	A	K	L	R	H	R	A	S	Q	T
Query Conservation																																.
Alig confidence											.	.																				.																																													.	.	.	.	.
Template Conservation											.	.																																																																	.	.	.	.	.
Template Sequence		L	K	V	X	T	V	F	G	T	.	.	R	P	E	A	I	K	X	A	P	L	V	L	E	L	K	K	Y	P	E	I	D	S	Y	V	T	V	T	A	Q	H	R	Q	X	L	D	Q	V	L	D	A	F	H	I	K	P	D	F	D	L	N	I	X	K	E	R	Q	T	L	A	E	I	T	S	N	.	.	.	.	.
Template Known Secondary structure										S	.	.														G	G	G		T	T										S		G	G	G	T							T	T				S								T	T										.	.	.	.	.
Template Predicted Secondary structure											.	.																																																																	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	I	H	R	K	N	T	W	Q	A	L	N	L	K	R	Y	G	A	E	S	R	N	L	I	L	S	A	I	C	G	Q	V	A	T	P	F	R	A	D	V	F	I	A	H	F	G	P	A	G	V	T	A	A	K	L	R	E	L	G	V	I	R	G	K	I	A	T	I	F	H	G	I	D	I	S	S	R	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	V	R	L	D	E	L	F	K	D	I	K	P	D	I	V	L	V	H	G	D	T	.	T	T	T	F	A	G	S	L	A	A	F	Y	H	Q	I	A	V	G	H	V	E	A	G	L	R	T	G	N	K	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S						T	T		.													T	T							S						S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
																												77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	H	Y	T	P	E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	G	C	P	R	E	K	I	A	V	S	R	M	G	V	D	M	T	R	F	S	P	R	P	V	K	A	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	L	H	V
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		S	P	F	P	E	E	L	N	R	Q	X	T	G	A	I	A	D	L	H	F	A	P	T	G	Q	A	K	D	N	L	L	K	E	N	K	K	A	D	S	I	F	V	T	G	N	T	A	I	D	A	L	N	T	T	V	R	D	G	Y	S	H	P	V	L	.	D	Q	V	G	E	D	K	X	I	L	L	T	X	E	N
Template Known Secondary structure		T	T	T	T													S					S	S										T	T			G	G	G																		S	S				S	T	T	.	T	T	T	T	T	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	A	C	R	Q	L	K	E	Q	G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	Y	Q	L	E	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	G	A	D	G	D	M	E	G	I	P	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	F	K	A	I	R	R	I	V	G	E	F	E	D	V	Q	V	V	Y	P	P	V	.	.	.	.	.	.	.	V	R	E	A	A	H	K	H	D	S	D	R	V	H	L	I	E	P	L	E	V	I	D	F	H	N	F	A	A	K	S	H	F	I	L	T	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T									.	.	.	.	.	.	.											S	S																				S							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240								.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	E	A	M	A	V	G	I	P	V	V	S	T	L	H	S	G	I	P	E	L	V	E	A	D	K	S	G	W	L	V	P	E	N	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V	I	N	R	E	L
Query Conservation
Alig confidence																.	.																			.	.															.																				.
Template Conservation																.	.																			.	.															.																				.
Template Sequence		V	Q	E	E	A	P	S	L	G	K	P	V	L	V	.	.	L	R	D	T	T	E	G	V	E	A	G	T	L	K	L	A	G	T	.	.	D	E	E	N	I	Y	Q	L	A	K	Q	L	L	T	.	D	P	D	E	Y	K	K	X	S	Q	A	S	N	P	Y	G	D	G	E	.	A	S	R	R	I	V	E	E	L
Template Known Secondary structure						G	G	G	G	T						.	.			S					T	T	T	T	S	S					S	.	.															.														T	T			S		.
Template Predicted Secondary structure																.	.																			.	.															.																				.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360
		400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	H	Y
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions