Job Description P71243 Confidence 70.75% Date Thu Jan 5 12:12:38 GMT 2012 Rank 154 Aligned Residues 304 % Identity 10% Template c3tovB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase family 9; PDBTitle: the crystal structure of the glycosyl transferase family 9 from2 veillonella parvula dsm 2008 Resolution 2.98 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		K	V	G	F	F	L	L	K	F	P	L	S	S	E	T	F	V	L	N	Q	I	T	A	F	I	D	M	.	.	G	F	E	V	E	I	L	A	L	Q	K	G	D	T	Q	N	T	H	A	A	W	T	K	Y	N	L	A	A	R	T	R	W	L	Q	D	E	P	T	G	K	V	A	K	L	R	H	R	A	S	Q	T
Query Conservation																													.	.
Alig confidence											.																		.	.									.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation											.																												.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		R	I	V	V	T	F	L	X	H	.	L	G	D	V	I	L	T	T	P	F	L	E	V	L	R	K	A	A	P	H	S	H	I	T	Y	V	I	.	.	.	.	.	D	E	K	L	Q	Q	V	X	E	Y	N	P	N	I	D	E	L	I	V	V	D	K	K	G	R	H	N	S	I	S	.	.	.	.	.	.	.	.
Template Known Secondary structure											.							T												T	T								.	.	.	.	.		G	G	G	G	G	G	T	T	T		T	T		S							T	T	T	T	T	S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																												.	.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	I	H	R	K	N	T	W	Q	A	L	N	L	K	R	Y	G	A	E	S	R	N	L	I	L	S	A	I	C	G	Q	V	A	T	P	F	R	A	D	V	F	I	A	H	F	G	P	A	G	V	T	A	A	K	L	R	E	L	G	V	I	R	G	K	I	A	T	I	F	H	G	I	D	I	S	S	R	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	N	E	V	A	R	E	I	N	A	K	G	K	T	D	I	V	I	.	.	N	L	H	P	N	E	R	T	S	Y	L	A	W	K	I	H	A	P	I	T	T	G	X	S	H	F	L	F	R	P	F	X	T	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.					S													S								G	G	G	G	G	G		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
																											73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.							.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.
Query Sequence		V	L	N	H	Y	T	P	E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	G	C	P	R	E	K	I	A	V	S	R	M	G	V	D	M	T	R	F	S	P	R	P	V	.	.	.	.	.	.	K	A	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E
Query Conservation																																																											.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	R	L	D	R	K	T	R	H	A	A	.	.	.	.	.	.	.	.	.	.	.	D	X	Y	I	N	V	L	E	Q	L	G	V	T	D	T	S	N	S	G	L	H	I	E	I	C	E	E	W	R	C	Q	A	Q	E	F	Y	S	S	H	G	L	T	D	T	D	I	L	I	G	F	N	I	G	S	A	V	P
Template Known Secondary structure							T	T	T	S				.	.	.	.	.	.	.	.	.	.	.											T								S	S																		T	T	T			T	T											S	S	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	G	L	H	V	A	I	E	A	C	R	Q	L	K	E	Q	G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	Y	Q	L	E	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	G	A	D	G	D
Query Conservation
Alig confidence																																													.																																.	.	.	.	.
Template Conservation																																													.																																.	.	.	.	.
Template Sequence		E	K	R	W	P	A	E	R	F	A	H	V	A	D	Y	F	G	R	L	G	Y	K	T	V	F	F	G	G	P	X	D	L	E	X	V	Q	P	V	V	E	Q	X	E	.	T	K	P	I	V	A	T	G	K	F	Q	L	G	P	L	A	A	A	X	N	R	C	N	L	L	I	T	N	D	S	G	.	.	.	.	.
Template Known Secondary structure		G	G																	T	T									G	G	G										T		S	.	S						T	T															S						S	S		.	.	.	.	.
Template Predicted Secondary structure																																													.																																.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.																							.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	G	I	P	V	A	L	M	E	A	M	A	V	G	I	P	V	V	S	T	L	H	S	G	I	P	E	L	V	E	A	D	K	S	G	W	L	V	P	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	P	X	H	V	G	I	S	Q	G	V	P	I	V	A	L	Y	G	P	S	N	P	F	F	Y	G	P	Y	Q	A	H	A	I	V	L	E	T	X	D	S	Y	E	S	X	K	K	I	I	K	E	G	N	Y	K	G	L	S	V	I	S	E	E	Q	V	I	K	A	A	E	T	L	L	L
Template Known Secondary structure		.	.	.	.	.	.								T	T									S	S						S			S	S	S						S		S											T					T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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