Job Description P71243 Confidence 98.55% Date Thu Jan 5 12:12:38 GMT 2012 Rank 49 Aligned Residues 286 % Identity 12% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	K	R	Y	G	A	E	S	R	N	L	I	L	S	A	I	C	G	Q	V	A	T	P	F	R	A	D	V	F	I	A	H	F	G	P	A	G	V	T	A	A	K	L	R	E	L	G	V	I	R	G	K	I	A	T	I	F	H	G	I	D	I	S	S	R	E	V	L	N	H	Y	T	P	E	Y	Q	Q	L
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	E	F	H	L	V	A	G	D	N	M	K	Q	K	L	E	F	I	R	S	V	C	E	S	N	G	A	A	I	F	Y	M	P	S	I	G	M	D	M	T	T	I	F	A	S	N	T	R	L	A	P	I	Q	A	I	A	L	G	H	P	A	T	T	H	S	D	F	I	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S								S	S																T		S					S			S	S	S							T	T	S			S	S							S	S		S					T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	G	C	P	R	E	K	I	A	V	S	R	.	.	.	.	.	M	G	V	D	M	T	R	F	S	P	R	P	V	K	A	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	L	H	V	A	I	E	A	C	R	Q
Query Conservation																																		.	.	.	.	.
Alig confidence		.	.	.	.													.	.					.	.									.	.	.	.	.
Template Conservation		.	.	.	.													.	.					.	.
Template Sequence		.	.	.	.	E	Y	V	I	V	E	D	D	Y	V	G	S	.	.	E	E	C	F	.	.	S	E	T	L	L	R	L	P	K	D	A	L	P	Y	V	P	S	A	L	A	P	E	K	V	D	Y	L	L	R	E	N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A
Template Known Secondary structure		.	.	.	.							G	G	G		S		.	.	G	G	G		.	.	S	S							T	T	S	S						T	T			S	S							S			S										S	T	T
Template Predicted Secondary structure		.	.	.	.													.	.					.	.
Template SS confidence
						381	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		L	K	E	Q	G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	Y	Q	L	E	.	.	.	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	G	A	D	G	D	M	E	G	I	P	V	A	L	M	E
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.																															.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.
Template Sequence		I	R	D	R	A	K	V	K	V	H	F	H	F	A	L	G	Q	S	N	G	I	T	H	P	Y	V	E	R	F	I	K	S	Y	L	G	D	S	A	T	A	H	P	H	S	P	Y	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	N	P	F	P	F	.	.	.	.	.	.	.	G	N	T	N	G	I	I	D
Template Known Secondary structure							S	S										T			T	T	T													G	G	G																		T		S						S	S	S	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.								.	.	520	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.							.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.			.	.	.	.	.	390	.			.
Predicted Secondary structure																								.	.	.	.	.	.					.																																				.	.								.	.
Query SS confidence																								.	.	.	.	.	.					.																																				.	.								.	.
Query Sequence		A	M	A	V	G	I	P	V	V	S	T	L	H	S	G	I	P	E	L	V	E	A	.	.	.	.	.	.	D	K	S	G	.	W	L	V	P	E	N	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	.	.	K	V	E	H	D	F	N	.	.	Q
Query Conservation																								.	.	.	.	.	.					.																																				.	.								.	.
Alig confidence																								.	.	.	.	.	.					.					.	.															.															.	.								.	.
Template Conservation																																							.	.															.
Template Sequence		M	V	T	L	G	L	V	G	V	C	K	T	G	A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	G	L	P	E	W	L	I	A	N	.	.	T	V	D	E	Y	V	E	R	A	V	R	L	A	E	.	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P
Template Known Secondary structure					T	T									S	S													T	T			G	G	G			S	.	.	S														.															S		T							S
Template Predicted Secondary structure																																							.	.															.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.			.	.	.	.	.	.	.	570	.	.	.	.	.	.		.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	N	R	E	L	A	S	L	L	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	M	G	Q	V	F	L	E	K	L	N	A	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		603	.	.	.	.	.	.	610	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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