Job Description P71243 Confidence 97.48% Date Thu Jan 5 12:12:38 GMT 2012 Rank 51 Aligned Residues 247 % Identity 11% Template c3l7mC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:teichoic acid biosynthesis protein f; PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		G	V	I	R	G	K	I	A	T	I	F	H	G	I	D	I	S	S	R	E	V	.	.	.	.	.	.	.	.	.	.	.	L	N	H	Y	T	P	E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	.	M	G	C	P	R	E	K	I	A	V	S	R	M	G	V	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		K	K	E	N	Q	T	Y	I	Q	T	W	H	G	T	P	L	K	R	L	A	N	D	M	K	V	V	R	M	P	G	T	T	T	P	K	Y	K	R	N	F	N	R	E	T	S	R	W	D	Y	L	I	S	P	N	R	Y	S	T	E	I	F	R	S	A	F	W	M	D	E	E	R	I	L	E	I	G	Y	P	R	N
Template Known Secondary structure				T	T	S							S				S	B			G	G	G							T	T															T	T		S					S	S											T	T			G	G	G				S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		208	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		M	T	R	F	S	P	R	P	V	K	A	.	.	.	.	.	.	.	.	.	.	.	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	.	.	.	.	.	.	.	L	H	V	A	I	E	A	C	R	Q	L	K	E	Q	G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		D	V	L	V	N	R	A	N	D	Q	E	Y	L	D	E	I	R	T	H	L	N	L	P	S	D	K	K	V	I	M	Y	A	P	T	W	R	D	D	E	F	V	S	K	G	K	Y	L	F	E	L	K	I	D	L	D	N	L	Y	K	E	L	G	D	D	Y	V	I	L	L	R	M	A	.	.	.	.	.	.	Y	L
Template Known Secondary structure							S	T	T												T	T			S	S												G	G	G			G	G	G	S	S					T	T										T	T	T									.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.							.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.										.	.	.	340
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.
Query Sequence		T	L	I	E	Q	Y	Q	L	E	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	G	A	D	G	D	M	E	G	I	P	V	A	L	M	E	A	M	A	V	G	I	P	V	V	S	T	L	H	.	.	.	.	.	.	.	.	.	S	G	I	P
Query Conservation																																																																					.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	N	A	L	D	L	S	G	Y	E	N	F	A	I	D	V	S	N	Y	N	D	V	S	E	L	F	L	I	S	D	C	L	I	T	D	.	.	.	.	.	.	.	.	.	.	.	Y	S	S	V	M	F	D	Y	G	I	L	K	R	P	Q	F	F	F	A	Y	D	I	D	K	Y	D	K	G	L	R	G	F	Y
Template Known Secondary structure				T	T				T	T		T	T	T					T	T		S								T		S					S	.	.	.	.	.	.	.	.	.	.	.	S		T	T					G	G	G	T								T	T	T	T	T	T	T	T	T			S	B	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.												.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	E	A	D	K	S	G	W	L	V	P	E	N	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V	I	N	R	E	L	A	S	L	L	Q	A	L
Query Conservation
Alig confidence															.	.															.
Template Conservation															.	.															.
Template Sequence		M	N	Y	M	E	D	L	P	G	P	I	Y	T	.	.	E	P	Y	G	L	A	K	E	L	K	N	L	D	K	.	V	Q	Q	Q	Y	Q	E	K	I	D	A	F	Y	D	R	F	C	S	V	D	N	G	K	A	S	Q	Y	I	G	D	L	I	H	K	D	I
Template Known Secondary structure		S		T	T	T	S	S	S	S				S	.	.	S	S													.																	T	T	T			S
Template Predicted Secondary structure															.	.															.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.			.	670	.	.	.	.	.	.	.	.	.	680	.	.		.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions