Job Description P71243 Confidence 96.48% Date Thu Jan 5 12:12:38 GMT 2012 Rank 55 Aligned Residues 229 % Identity 15% Template c3ddsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycogen phosphorylase, liver form; PDBTitle: crystal structure of glycogen phosphorylase complexed with an2 anthranilimide based inhibitor gsk261 Resolution 1.80 Å

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		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	.	.	.	.	.	.	G	C	P	R	E	K	I	A	V	S	R	M	G	V	D	M	T	R	F	S	P	R	P	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	H	L	C	I	V	G	S	H	A	V	N	G	V	A	K	I	H	S	D	I	V	K	T	K	V	F	K	D	F	S	E	L	E	P	D	K	F	Q	N	K	T	N	G	I	T	P	R	R	W	L	L	L	C	N	P	G	L	A	E	L	I	A	E	K	I	G	E	D	Y	V	K	D	L	S	Q	L	T	K
Template Known Secondary structure									T		S					S	S										T	T	T								G	G	G								B		T							T														S	G	G	G	T		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
																																							219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.								.	.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.									.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.									.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	L	H	V	.	A	I	E	A	C	R	Q	L	.	.	.	.	.	.	.	K	E	Q	G	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	H	S	F	L	G	D	D	V	F	L	R	E	L	A	K	V	K	Q	E	N	K	L	K	F	S	Q	F	L	E	T	E	Y	K	V	K	I	N	P	S	S	M	F	D	V	Q	V	K	R	I	H	E	Y	K	R	Q	L	L	N	C	L	H	V	I	T	M	Y	N	R	I	K	K	D	P	K	K	L	F	V	P
Template Known Secondary structure		G	G	G	G	T	T																																	T	T	S							S				T	T	T	T																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.													.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.						.	.
Query Sequence		F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	L	E	D	.	.	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	G	A	D	G	D	M	E	G	I	P	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.						.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.						.	.																																.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		R	T	V	I	I	G	G	K	A	A	P	G	Y	H	M	A	K	M	I	I	K	L	I	T	S	V	A	D	V	V	N	N	D	P	M	V	G	S	K	L	K	V	I	F	L	E	N	Y	R	V	S	L	A	E	K	V	I	P	A	T	D	L	S	E	Q	I	S	T	A	G	T	.	.	.	.	E	A	S	G	T
Template Known Secondary structure												T	T																						T	T	T	G	G	G							T	T										G	G	G		S								T	T	S	.	.	.	.		S			S
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.					.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.																																											.	.	.
Predicted Secondary structure																												.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	M	E	A	M	A	V	G	I	P	V	V	S	T	L	H	S	G	I	P	E	L	V	E	A	.	.	D	K	S	G	W	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	N
Query Conservation																												.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	M	K	F	M	L	N	G	A	L	T	I	G	T	M	D	G	A	N	V	E	M	A	E	E	A	G	E	E	N	L	F	I	F	G	M	R	I	D	D	V	A	A	L	D	K	K	G	Y	E	A	K	E	Y	Y	E	A	L	P	E	L	K	L	V	I	D	Q	I	D	N	G	F	F	S	P	K	Q	P	D
Template Known Secondary structure									T	T							S		T	T										G	G	G	S				S																T																				T	T	T		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
		356	.	.	.	360	.																							.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	R	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V	I	N	R	E	L	A	S
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																.
Template Conservation																																						.																.
Template Sequence		L	F	K	D	I	I	N	M	L	F	Y	H	D	R	F	K	V	F	A	D	Y	E	A	Y	V	K	C	Q	D	K	V	S	Q	L	Y	M	.	N	P	K	A	W	N	T	M	V	L	K	N	I	A	A	.	S	G	K	F	S	S	D	R	T	I	K	E	Y	A	Q
Template Known Secondary structure		T	T												T	T																					T	.															T	.		G	G	G	B
Template Predicted Secondary structure																																						.																.
Template SS confidence
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.		.	.	.	.	.	.	.	800	.	.	.	.	.	.	.		.	.	810	.	.	.	.	.	.	.	.	.	820	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions