Job Description P71243 Confidence 100.00% Date Thu Jan 5 12:12:38 GMT 2012 Rank 7 Aligned Residues 397 % Identity 17% Template c2qzsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycogen synthase; PDBTitle: crystal structure of wild-type e.coli gs in complex with adp2 and glucose(wtgsb) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		M	K	V	G	F	F	L	L	K	F	P	.	.	.	.	.	L	S	S	E	T	F	V	L	N	Q	I	T	A	F	I	D	M	G	F	E	V	E	I	L	A	L	Q	.	.	.	.	.	.	K	G	D	T	Q	N	T	H	A	A	W	T	K	Y	N	L	A	A	R	T	R	W	L	Q	D	E	P	T	G	K	V
Query Conservation													.	.	.	.	.																												.	.	.	.	.	.
Alig confidence													.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	V	L	H	V	C	S	E	M	F	P	L	L	K	T	G	G	L	A	D	V	I	G	A	L	P	A	A	Q	I	A	D	G	V	D	A	R	V	L	L	P	A	F	P	D	I	R	R	G	V	T	D	A	Q	V	V	S	R	R	D	T	F	A	G	H	I	T	L	L	F	G	H	Y	N	G	V	G	I	Y
Template Known Secondary structure									S		B	T	T	T	B		S	S																T	T																		T	T										T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	R	H	R	A	S	Q	T	L	R	G	I	H	R	K	N	T	W	Q	A	L	N	L	K	R	Y	G	A	E	S	R	N	L	I	L	S	A	I	C	G	Q	V	A	T	P	F	R	A	D	V	F	I	A	H	F	G	P	A	G	V	T	A	A	K	L	R	E	L	G	V	I	R	G	K	I	A	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	D	A	P	H	L	Y	D	R	P	G	S	P	Y	H	D	T	N	L	F	A	Y	T	D	N	V	L	R	F	A	L	L	G	W	V	G	A	E	M	A	S	G	L	D	P	F	W	R	P	D	V	V	H	A	H	D	W	H	A	G	L	A	P	A	Y	L	A	A	R	G	R	P	A	K	S	V	F	T	V
Template Known Secondary structure												S	S		S	S	B		T	T	S		B		T	T																T	T	T	S	S	T	T				S						T	G	G	G	T	T								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.													.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	H	G	I	D	I	S	S	R	E	V	L	N	H	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	.	.	.	.	.	.	.	.	.	.	.	.	G	C	P	R	E	K
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	N	L	A	Y	Q	G	M	F	Y	A	H	H	M	N	D	I	Q	L	P	W	S	F	F	N	I	H	G	L	E	F	N	G	Q	I	S	F	L	K	A	G	L	Y	Y	A	D	H	I	T	A	V	S	P	T	Y	A	R	E	I	T	E	P	Q	F	A	Y	G	M	E	G	L	L	Q	Q	R	H	R	E	G	R
Template Known Secondary structure		S		T	T							G	G	G	G	G	T	T	T			G	G	G		S	T	T	T	T			T	T													S					S	S							T	T	S					T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																													.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	V	S	R	M	G	V	D	M	T	R	F	S	P	R	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	L	H	V	A	I	E	A	C	R	Q	L	K	E	Q
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	G	V	L	N	G	V	D	E	K	I	W	S	P	E	T	D	L	L	L	A	S	R	Y	T	R	D	T	L	E	D	K	A	E	N	K	R	Q	L	Q	I	A	M	G	L	K	V	D	D	K	V	P	L	F	A	V	V	S	R	L	T	S	Q	K	G	L	D	L	V	L	E	A	L	P	G	L	L	E	Q
Template Known Secondary structure											T	T	T	S		T	T	T		T	T	S	S	S				T	T		G	G	G	G												T					T	T	S										S	G	G	G															T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	Y	Q	L	E	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	G	A	D	G	D	M	E	G	I	P	V	A	L	M	E	A	M	A	V	G	I	P
Query Conservation
Alig confidence				.	.																																																				.	.	.	.	.	.
Template Conservation				.	.																																																				.	.	.	.	.	.
Template Sequence		G	G	.	.	Q	L	A	L	L	G	A	G	D	P	V	L	Q	E	G	F	L	A	A	A	A	E	Y	P	G	Q	V	G	V	Q	I	G	Y	H	E	A	F	S	H	R	I	M	G	G	A	D	V	I	L	V	P	.	.	.	.	.	.	S	R	F	E	P	C	G	L	T	Q	L	Y	G	L	K	Y	G	T	L
Template Known Secondary structure		T		.	.																							S	T	T	T						S														S						.	.	.	.	.	.		S			S	S		S									T
Template Predicted Secondary structure				.	.																																																				.	.	.	.	.	.
Template SS confidence
		321	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.										.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		V	V	S	T	L	H	S	G	I	P	E	L	V	E	A	D	.	.	.	.	.	.	.	.	.	K	S	G	W	L	V	P	E	N	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V	I	N	R	E	L	A	S
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																		.
Template Sequence		P	L	V	R	R	T	G	G	L	A	D	T	V	S	D	C	S	L	E	N	L	A	D	G	V	A	S	G	F	V	F	E	D	S	N	A	W	S	L	L	R	A	I	R	R	A	F	V	.	L	W	S	R	P	S	L	W	R	F	V	Q	R	Q	A	M	A	M	D	F	S	W	Q	V	A	A	K	S	Y	R	E
Template Known Secondary structure						S	S									B								T	T				B					S	S	S														.			T	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		402	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	Y	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.