Job Description P71243 Confidence 100.00% Date Thu Jan 5 12:12:38 GMT 2012 Rank 21 Aligned Residues 356 % Identity 12% Template c2q6vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp Resolution 2.28 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	V	G	F	F	L	L	K	F	P	L	S	S	E	T	F	V	L	N	Q	I	T	A	F	I	D	M	G	F	E	V	E	I	L	A	L	Q	K	G	D	T	Q	N	T	H	A	A	W	T	K	Y	N	L	A	A	R	T	R	W	L	Q	D	E	P	T	G	K	V	A	K	L	R	H	R	A	S	Q	T	L
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		C	Y	L	V	L	S	S	H	D	F	R	T	P	R	R	A	N	I	H	F	I	T	D	Q	L	A	L	R	G	T	.	T	R	F	F	S	L	R	Y	S	R	L	S	R	M	K	G	D	M	R	L	P	L	D	D	T	A	N	T	V	V	S	H	N	G	V	D	C	Y	L	W	R	T	T	V	H	P	F	N	T
Template Known Secondary structure								S	S		T	T		S	S															S		.							S		B	S	G	G	G	T	T	T		T	T	G	G	G	G	G	G	T	T	S					T	T								B	S	S
Template Predicted Secondary structure																																.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	H	R	K	N	T	W	Q	A	L	N	L	K	R	Y	G	A	E	S	R	N	L	I	L	S	A	I	C	G	Q	V	A	T	P	F	R	A	D	V	F	I	A	H	F	G	P	A	G	V	T	A	A	K	L	R	E	L	G	V	I	R	G	K	I	A	T	I	F	H	G	I	D	I	S	S	R	E	V
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.																							.	.
Template Conservation																															.	.	.	.	.	.	.	.																							.	.
Template Sequence		R	R	S	W	L	R	P	V	E	D	A	M	F	R	W	Y	A	A	H	P	P	K	Q	L	L	D	W	M	R	.	.	.	.	.	.	.	.	E	S	D	V	I	V	F	E	S	G	I	A	V	A	F	I	E	L	A	K	R	V	.	.	N	P	A	A	K	L	V	Y	R	A	S	D	G	L	S	T	I	N	V
Template Known Secondary structure		S		G	G	G																									.	.	.	.	.	.	.	.			S						S	S	G	G	G	G	G								.	.		T	T	S							S	S		T	T	T	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	H	Y	T	P	E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	G	C	P	R	E	K	I	A	V	S	R	M	G	V	D	M	T	R	F	S	P	R	P	V	K	A	P	A	T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	L	H	V	A
Query Conservation
Alig confidence																												.	.	.	.																							.	.
Template Conservation																												.	.	.	.																							.	.
Template Sequence		A	S	Y	I	E	R	E	F	D	R	V	A	P	T	L	D	V	I	A	L	V	S	P	A	M	A	.	.	.	.	A	E	V	V	S	R	D	N	V	F	H	V	G	H	G	V	D	H	N	L	D	Q	.	.	L	G	D	P	S	P	Y	A	E	G	I	H	A	V	A	V	G	S	M	L	F	D	P	E	F	F
Template Known Secondary structure													G	G	G		S					S		G	G	G	G	.	.	.	.	G	G		S		S	T	T								B		T	T				.	.		T		S		S			S	S									T	T	B
Template Predicted Secondary structure																												.	.	.	.																							.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		I	E	A	C	R	Q	L	K	E	Q	G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	Y	Q	L	E	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D	V	F	L	L	P	S	V	T	.	G	A	D	G	D	M	E	G	I	P	V
Query Conservation																																																																						.
Alig confidence									.	.	.	.														.	.	.	.	.	.	.	.																																					.
Template Conservation									.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		V	V	A	S	K	A	F	.	.	.	.	P	Q	V	T	F	H	V	I	G	S	G	M	G	.	.	.	.	.	.	.	.	R	H	P	G	Y	G	D	N	V	I	V	Y	G	E	M	K	H	A	Q	T	I	G	Y	I	K	H	A	R	F	G	I	A	P	Y	A	S	E	Q	V	P	V	Y	L	A	D	S	S	M
Template Known Secondary structure									.	.	.	.	T	T							S		S	S		.	.	.	.	.	.	.	.			T	T			T	T																		T		S						B	S		S		S		T	T
Template Predicted Secondary structure									.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.									.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	E	A	M	A	V	G	I	P	V	V	S	T	L	H	S	G	I	P	E	L	V	E	A	D	K	S	G	W	L	V	P	E	N	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V	I	N	R	E	L
Query Conservation
Alig confidence																								.	.	.	.	.																								.								.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																								.								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	L	Q	Y	D	F	F	G	L	P	A	V	C	P	N	A	V	V	G	P	Y	.	.	.	.	.	K	S	R	F	G	Y	T	P	G	N	A	D	S	V	I	A	A	I	T	Q	A	L	E	.	A	P	R	V	R	Y	R	.	.	.	.	.	.	.	.	.	.	Q	C	L	N	W	S	D	T	T	D	R	V
Template Known Secondary structure									T	T							G	G	G	T		S		.	.	.	.	.	S	S						T	T															.							S	.	.	.	.	.	.	.	.	.	.				B
Template Predicted Secondary structure																								.	.	.	.	.																								.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.											.	360	.	.	.	.	.	.	.	.	.	370
		400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		371	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions