Job Description P71243 Confidence 99.89% Date Thu Jan 5 12:12:38 GMT 2012 Rank 34 Aligned Residues 354 % Identity 12% Template c2iyaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering Resolution 1.7 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		M	K	V	G	F	F	L	L	K	F	P	L	S	S	E	.	T	F	V	L	N	Q	I	T	A	F	I	D	M	G	F	E	V	E	I	L	A	L	Q	K	G	D	T	Q	N	T	H	A	A	W	T	K	Y	N	L	A	A	R	T	R	W	L	Q	D	E	P	T	G	K	V	A	K	L	R	H	R	A	S	Q	T
Query Conservation																	.
Alig confidence									.	.							.
Template Conservation									.	.
Template Sequence		R	H	I	S	F	F	N	.	.	I	P	G	H	G	H	V	N	P	S	L	G	I	V	Q	E	L	V	A	R	G	H	R	V	S	Y	A	I	T	D	E	F	A	A	Q	V	K	A	A	G	A	T	P	V	V	Y	D	S	I	L	P	K	E	S	N	P	E	E	S	W	P	E	D	Q	E	S	A	M	G	L	F
Template Known Secondary structure									.	.		S																		T	T																		T	T										S			T	T		T	T					S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		13	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		L	R	G	I	H	R	K	N	T	W	Q	A	L	N	L	K	R	Y	G	A	E	S	R	N	L	I	L	S	A	I	C	G	Q	V	A	T	P	F	R	A	D	V	F	I	A	H	F	G	P	A	G	V	T	A	A	K	L	R	E	L	G	V	I	R	G	K	I	A	T	I	F	H	G	I	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.												.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		L	D	E	A	V	R	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	E	D	A	Y	A	D	D	R	P	D	L	I	V	Y	D	I	A	S	W	P	A	P	V	L	G	R	K	W	.	.	.	.	D	I	P	F	V	Q	L	S	P	T	F	V	A	Y	E	G	F
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S			S						T	T		T										.	.	.	.	T								S	S					T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.																					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
						154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.										.	220
Predicted Secondary structure		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	I	S	S	R	E	V	L	N	H	Y	T	P	E	Y	Q	Q	L	F	R	R	G	D	L	M	L	P	I	S	D	L	W	A	G	R	L	Q	K	M	G	C	P	R	E	K	I	A	V	S	R	M	G	V	D	M	T	R	F	S	P	R	P	V	K	A	.	.	.	.	.	.	.	.	.	P	A
Query Conservation		.	.	.	.																																																																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																					.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		E	E	D	V	P	A	V	Q	D	P	T	A	D	G	L	V	R	F	F	T	R	L	S	A	F	L	E	E	H	G	V	D	T	P	A	T	E	F	L	I	.	.	.	.	A	P	N	R	C	I	V	A	L	P	R	T	F	Q	I	K	G	D	T	V	G	D	N	Y	T	F	V	G	P	T	Y	G	D	R	S	W
Template Known Secondary structure					S	G	G	G	S		T	T																		T	T			S								.	.	.	.			S	S				S	S		T	T	T	S	T	T	G	G	G	S		T	T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	E	I	I	S	V	A	R	L	T	E	K	K	G	L	H	V	A	I	E	A	C	R	Q	L	K	E	Q	G	V	A	F	R	Y	R	I	L	G	I	G	P	W	E	R	R	L	R	T	L	I	E	Q	Y	Q	L	E	D	V	V	E	M	P	G	F	K	P	S	H	E	V	K	A	M	L	D	D	A	D
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	R	P	V	L	L	I	A	L	G	S	A	F	T	D	H	L	D	F	Y	R	T	C	L	S	A	V	D	G	L	D	W	H	V	V	L	S	V	G	R	F	V	D	P	A	D	.	.	.	.	.	.	.	.	.	L	G	E	V	P	P	N	V	E	V	H	Q	W	V	P	Q	L	D	I	L	T	K	A	S
Template Known Secondary structure													S	S	S															T	T		S	S								S	S	S		G	G	G	.	.	.	.	.	.	.	.	.	G		S			T	T					S	S								T	T		S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.										.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																			.	.
Query SS confidence																																								.	.	.	.																			.	.
Query Sequence		V	F	L	L	P	S	V	T	G	A	D	G	D	M	E	G	I	P	V	A	L	M	E	A	M	A	V	G	I	P	V	V	S	T	L	H	S	G	.	.	.	.	I	P	E	L	V	E	A	D	K	S	G	W	L	V	P	E	N	D	.	.	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E
Query Conservation																																								.	.	.	.																			.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																									.	.	.	.																			.	.														.
Template Conservation						.	.	.	.	.	.	.	.	.	.																																																														.
Template Sequence		A	F	I	T	.	.	.	.	.	.	.	.	.	.	H	A	G	M	G	S	T	M	E	A	L	S	N	A	V	P	M	V	A	V	P	Q	I	A	E	Q	T	M	N	A	E	R	I	V	E	L	G	L	G	R	H	I	P	R	D	Q	V	T	A	E	K	L	R	E	A	V	L	A	V	A	S	.	D	P	G	V
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.													T	T								S	S													T	T	S						G	G	G																.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																																														.
Template SS confidence
		324	.	.	.											.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V	I	N	R	E	L	A	S	L	L	Q	A
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		A	E	R	L	A	A	V	R	Q	E	I	R	E	A	.	G	G	A	R	A	A	A	D	I	L	E	G	I	L	A	E
Template Known Secondary structure														T	S	.
Template Predicted Secondary structure																.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions