Job Description P71243 Confidence 22.83% Date Thu Jan 5 12:12:38 GMT 2012 Rank 405 Aligned Residues 87 % Identity 8% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		V	A	L	M	E	A	M	A	V	G	I	P	V	V	S	.	.	.	.	T	L	H	S	G	I	P	E	L	V	E	A	D	K	S	G	W	L	V	P	E	N	D	A	R	A	L	A	Q	R	L	A	A	F	S	Q	L	D	T	D	E	L	A	P	V	V	K	R	A	R	E	K	V	E	H	D	F	N	Q	Q	V
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																																					.
Template Conservation																																																									.
Template Sequence		L	K	W	I	K	E	R	S	P	E	T	E	V	I	V	I	T	G	H	G	T	I	K	T	A	V	E	A	M	K	M	G	A	Y	D	F	L	T	K	P	C	M	L	E	E	I	E	L	T	I	N	K	A	I	E	.	H	R	K	L	R	K	E	N	E	L	L	R	R	E	K	D	L	K	E	E	E	Y	V	F
Template Known Secondary structure										T	T	S								T	T										T	T	T								S																.																	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		395	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	R	E	L	A	S	L	L	Q	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	P	K	M	K	E	I	L	E	K	I
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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