Job Description P77171 Confidence 95.93% Date Thu Jan 5 12:25:56 GMT 2012 Rank 113 Aligned Residues 83 % Identity 13% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

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		1	.	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70
Predicted Secondary structure											.	.	.																			.	.	.																																						.	.	.	.
Query SS confidence											.	.	.																			.	.	.																																						.	.	.	.
Query Sequence		M	E	K	N	S	L	F	S	Q	.	.	.	R	I	R	L	R	H	L	H	T	F	V	A	V	A	Q	Q	G	T	.	.	.	L	G	R	A	A	E	T	L	N	L	S	Q	P	A	L	S	K	T	L	N	E	L	E	Q	L	T	G	A	R	L	F	E	R	G	R	Q	G	.	.	.	.	A	Q	L	T	L	P
Query Conservation											.	.	.																			.	.	.																																						.	.	.	.
Alig confidence											.	.	.																			.	.	.																									.	.	.											.	.	.	.
Template Conservation																																																											.	.	.
Template Sequence		L	E	S	K	K	D	E	I	R	C	C	Y	K	I	T	D	T	D	V	A	V	L	L	K	X	V	E	I	E	K	P	I	T	S	E	E	L	A	D	I	F	K	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	.	.	.	L	G	L	V	V	R	T	K	T	P	K	Y	Y	Y	S	I	S	S	N	I
Template Known Secondary structure		G	G	G	G									T																	S												T																.	.	.	T	T	S															T	T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Q	F	L	T	H	A	V	R	V	L	D	A	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	K	I	R	N	D	L	L	N	C	A	K	R	X	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions